Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:224944665..224946199-chr1:224947747..224949532,2	K562	blood:

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs1436167	0.87[ASN][1000 genomes]
rs1436173	0.83[ASN][1000 genomes]
rs1436174	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1436176	1.00[CHB][hapmap];0.88[JPT][hapmap];0.94[ASN][1000 genomes]
rs1898190	0.94[ASN][1000 genomes]
rs1898191	0.94[ASN][1000 genomes]
rs2574875	0.90[ASN][1000 genomes]
rs2574877	0.86[AMR][1000 genomes]
rs2574878	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2574879	0.83[AMR][1000 genomes]
rs2574881	0.83[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs2662906	0.80[AMR][1000 genomes]
rs2662907	0.86[AMR][1000 genomes]
rs2662909	0.89[ASN][1000 genomes]
rs2662917	0.94[CHB][hapmap];0.89[JPT][hapmap];0.80[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2662922	0.83[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs2662923	0.83[AMR][1000 genomes]
rs2802560	0.83[ASN][1000 genomes]
rs2802561	0.86[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs2802562	0.83[AMR][1000 genomes]
rs2802564	0.91[ASN][1000 genomes]
rs2802730	0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2802740	0.82[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs2802741	0.94[ASN][1000 genomes]
rs2802742	0.94[ASN][1000 genomes]
rs2802745	0.90[ASN][1000 genomes]
rs2997477	0.90[ASN][1000 genomes]
rs2997499	0.85[AFR][1000 genomes];0.83[ASN][1000 genomes]
rs2997500	0.90[ASN][1000 genomes]
rs3012182	0.82[AMR][1000 genomes]
rs3012183	0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv524125	chr1:224902054-225021860	Enhancers Weak transcription Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:224935800-224946200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr1:224943600-224946000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr1:224944600-224944800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell

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