Variant report

Variant rs2804271
Chromosome Location chr9:574663-574664
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:549800-593800 Weak transcription Lung lung
2 chr9:570400-576000 Enhancers Brain Hippocampus Middle brain
3 chr9:570600-579600 Enhancers Fetal Heart heart
4 chr9:571000-576600 Enhancers Breast Myoepithelial Primary Cells Breast
5 chr9:572000-589400 Weak transcription Aorta Aorta
6 chr9:572200-589800 Weak transcription Rectal Mucosa Donor 31 rectum
7 chr9:573400-575200 Enhancers A549 lung
8 chr9:573600-575200 Enhancers H1 Cell Line embryonic stem cell
9 chr9:573600-575200 Enhancers HUES64 Cell Line embryonic stem cell
10 chr9:573800-574800 Enhancers Placenta Placenta
11 chr9:573800-575200 Enhancers HUES6 Cell Line embryonic stem cell
12 chr9:573800-575400 Enhancers HUES48 Cell Line embryonic stem cell
13 chr9:573800-575400 Enhancers iPS-18 Cell Line embryonic stem cell
14 chr9:573800-575400 Enhancers iPS-20b Cell Line embryonic stem cell
15 chr9:574000-574800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr9:574000-574800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr9:574000-574800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
18 chr9:574000-574800 Enhancers Fetal Muscle Trunk muscle
19 chr9:574000-574800 Enhancers Pancreas Pancrea
20 chr9:574000-575000 Enhancers Left Ventricle heart
21 chr9:574000-575200 Enhancers Brain Anterior Caudate brain
22 chr9:574000-575200 Enhancers Right Ventricle heart
23 chr9:574000-576600 Enhancers Right Atrium heart
24 chr9:574200-579800 Weak transcription Fetal Intestine Small intestine
25 chr9:574200-581400 Weak transcription ES-I3 Cell Line embryonic stem cell
26 chr9:574200-582200 Weak transcription Fetal Lung lung
27 chr9:574400-574800 Weak transcription Brain Inferior Temporal Lobe brain
28 chr9:574400-575200 Weak transcription Brain Cingulate Gyrus brain
29 chr9:574400-575800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr9:574400-576400 Weak transcription Gastric stomach
31 chr9:574400-581200 Weak transcription Spleen Spleen
32 chr9:574400-589000 Weak transcription Brain Substantia Nigra brain
33 chr9:574600-575000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
34 chr9:574600-577800 Weak transcription Fetal Intestine Large intestine
35 chr9:574600-579600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr9:574600-580600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
37 chr9:574600-581800 Weak transcription NHEK skin
38 chr9:574600-582800 Weak transcription Placenta Amnion Placenta Amnion
39 chr9:574600-584600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr9:574600-589400 Weak transcription HMEC breast

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