Variant report

Variant rs2804281
Chromosome Location chr9:591922-591923
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:549800-593800 Weak transcription Lung lung
2 chr9:583000-594400 Weak transcription Fetal Kidney kidney
3 chr9:589000-592000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
4 chr9:589200-592600 Enhancers Brain Anterior Caudate brain
5 chr9:589400-592800 Enhancers HMEC breast
6 chr9:589400-593400 Enhancers A549 lung
7 chr9:589800-593000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr9:590000-592000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr9:590000-625000 Weak transcription Aorta Aorta
10 chr9:590200-592000 Weak transcription H1 Cell Line embryonic stem cell
11 chr9:590200-592000 Weak transcription HUES48 Cell Line embryonic stem cell
12 chr9:590200-592000 Weak transcription HUES64 Cell Line embryonic stem cell
13 chr9:590200-592000 Weak transcription Right Ventricle heart
14 chr9:590200-593000 Enhancers Breast Myoepithelial Primary Cells Breast
15 chr9:590200-600200 Weak transcription Placenta Placenta
16 chr9:590200-621600 Weak transcription Psoas Muscle Psoas
17 chr9:590400-592600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr9:590400-593000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr9:591000-592200 Enhancers Fetal Intestine Small intestine
20 chr9:591400-592200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
21 chr9:591400-592200 Enhancers Gastric stomach
22 chr9:591400-592200 Enhancers Rectal Mucosa Donor 31 rectum
23 chr9:591400-592200 Enhancers Sigmoid Colon Sigmoid Colon
24 chr9:591400-592400 Enhancers Brain Angular Gyrus brain
25 chr9:591400-592400 Enhancers Esophagus oesophagus
26 chr9:591400-592600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
27 chr9:591400-592600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr9:591400-592600 Enhancers HUES6 Cell Line embryonic stem cell
29 chr9:591400-592600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
30 chr9:591400-592600 Enhancers Brain Inferior Temporal Lobe brain
31 chr9:591400-592600 Enhancers Brain Substantia Nigra brain
32 chr9:591400-592600 Enhancers Fetal Intestine Large intestine
33 chr9:591400-592600 Enhancers Left Ventricle heart
34 chr9:591400-592600 Enhancers Pancreas Pancrea
35 chr9:591400-593000 Enhancers Brain Hippocampus Middle brain
36 chr9:591400-593000 Enhancers Right Atrium heart
37 chr9:591400-593000 Enhancers Stomach Mucosa stomach
38 chr9:591400-594200 Enhancers iPS-18 Cell Line embryonic stem cell
39 chr9:591400-601600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
40 chr9:591600-592000 Enhancers Duodenum Mucosa Duodenum
41 chr9:591600-592800 Enhancers HepG2 liver
42 chr9:591600-596400 Weak transcription Brain Cingulate Gyrus brain
43 chr9:591800-592000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr9:591800-592200 Flanking Active TSS Fetal Heart heart
45 chr9:591800-592800 Enhancers NHEK skin
46 chr9:591800-596200 Weak transcription Cortex derived primary cultured neurospheres brain

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