Variant report

Variant rs2804312
Chromosome Location chr9:556115-556116
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:546600-557000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr9:546600-569400 Weak transcription Esophagus oesophagus
3 chr9:547200-557800 Weak transcription Placenta Placenta
4 chr9:547400-557600 Weak transcription H1 Cell Line embryonic stem cell
5 chr9:547600-557600 Weak transcription HUES64 Cell Line embryonic stem cell
6 chr9:547600-571200 Weak transcription Aorta Aorta
7 chr9:547800-556400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr9:547800-556800 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr9:547800-563000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr9:548200-560400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
11 chr9:549600-557600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr9:549600-557800 Weak transcription ES-I3 Cell Line embryonic stem cell
13 chr9:549800-557800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr9:549800-558000 Weak transcription Brain Angular Gyrus brain
15 chr9:549800-569000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
16 chr9:549800-593800 Weak transcription Lung lung
17 chr9:550200-556400 Weak transcription Fetal Intestine Large intestine
18 chr9:550200-562400 Weak transcription Fetal Intestine Small intestine
19 chr9:550400-556400 Weak transcription Stomach Mucosa stomach
20 chr9:550800-562600 Weak transcription Rectal Mucosa Donor 31 rectum
21 chr9:551600-557400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr9:552200-557000 Enhancers Breast Myoepithelial Primary Cells Breast
23 chr9:552200-557600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr9:552200-557800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
25 chr9:552400-560400 Weak transcription Brain Cingulate Gyrus brain
26 chr9:552400-560800 Weak transcription Brain Inferior Temporal Lobe brain
27 chr9:552400-565400 Weak transcription Fetal Muscle Leg muscle
28 chr9:552400-574000 Weak transcription Right Ventricle heart
29 chr9:552800-560400 Weak transcription Cortex derived primary cultured neurospheres brain
30 chr9:552800-560800 Weak transcription Brain Anterior Caudate brain
31 chr9:553000-556800 Weak transcription Right Atrium heart
32 chr9:553000-562400 Weak transcription Brain Substantia Nigra brain
33 chr9:553200-561000 Weak transcription Fetal Lung lung
34 chr9:553200-564800 Weak transcription Fetal Muscle Trunk muscle
35 chr9:554800-556400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr9:555000-568400 Weak transcription Pancreas Pancrea
37 chr9:555400-557000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr9:555400-557600 Weak transcription Gastric stomach
39 chr9:555400-562400 Weak transcription Sigmoid Colon Sigmoid Colon
40 chr9:555400-568400 Weak transcription Left Ventricle heart
41 chr9:555600-557400 Enhancers A549 lung
42 chr9:555600-557800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr9:555800-556800 Weak transcription Brain Hippocampus Middle brain
44 chr9:555800-557000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr9:555800-557600 Weak transcription HUES6 Cell Line embryonic stem cell
46 chr9:555800-557800 Weak transcription HMEC breast
47 chr9:555800-558200 Weak transcription iPS-15b Cell Line embryonic stem cell
48 chr9:555800-558200 Weak transcription iPS-20b Cell Line embryonic stem cell
49 chr9:556000-556200 Enhancers Fetal Heart heart
50 chr9:556000-558600 Enhancers NHEK skin

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