The 2.0 version of rSNPBase

Variant report

Variant rs2808008
Chromosome Location chr1:220420395-220420396
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:220379200-220422600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr1:220381200-220422000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr1:220384200-220420600 Weak transcription Fetal Kidney kidney
4 chr1:220384200-220423000 Weak transcription Esophagus oesophagus
5 chr1:220384200-220425800 Weak transcription Placenta Amnion Placenta Amnion
6 chr1:220393000-220441000 Weak transcription NHDF-Ad bronchial
7 chr1:220393800-220425800 Weak transcription Gastric stomach
8 chr1:220394000-220422600 Weak transcription Thymus Thymus
9 chr1:220398400-220420400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr1:220400400-220423000 Weak transcription Pancreas Pancrea
11 chr1:220400600-220422200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
12 chr1:220400800-220422200 Weak transcription Duodenum Smooth Muscle Duodenum
13 chr1:220401000-220425200 Weak transcription Right Ventricle heart
14 chr1:220401200-220422800 Weak transcription Rectal Smooth Muscle rectum
15 chr1:220401400-220420600 Weak transcription Fetal Intestine Small intestine
16 chr1:220401400-220422600 Weak transcription Fetal Stomach stomach
17 chr1:220401400-220422600 Weak transcription Left Ventricle heart
18 chr1:220401600-220425800 Weak transcription Stomach Smooth Muscle stomach
19 chr1:220402200-220420800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr1:220403800-220423000 Weak transcription Lung lung
21 chr1:220404000-220425000 Weak transcription NHLF lung
22 chr1:220404600-220420800 Weak transcription NHEK skin
23 chr1:220405400-220420800 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr1:220405800-220420600 Weak transcription HSMM muscle
25 chr1:220405800-220422800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
26 chr1:220405800-220423000 Weak transcription Aorta Aorta
27 chr1:220406000-220422000 Weak transcription Liver Liver
28 chr1:220406000-220422000 Weak transcription HepG2 liver
29 chr1:220406000-220422200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr1:220406000-220422600 Weak transcription Fetal Thymus thymus
31 chr1:220406000-220425200 Weak transcription HSMMtube muscle
32 chr1:220406200-220420400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr1:220406200-220420400 Weak transcription Primary B cells from cord blood blood
34 chr1:220406200-220420400 Weak transcription Primary T cells fromperipheralblood blood
35 chr1:220406200-220420400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr1:220406200-220420600 Weak transcription Fetal Lung lung
37 chr1:220406200-220422000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr1:220406200-220422000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
39 chr1:220406200-220423400 Weak transcription Osteobl bone
40 chr1:220406400-220420400 Weak transcription Primary hematopoietic stem cells blood
41 chr1:220406400-220420800 Weak transcription Monocytes-CD14+_RO01746 blood
42 chr1:220406800-220422600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr1:220409000-220422000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr1:220409400-220422800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
45 chr1:220410000-220420600 Weak transcription A549 lung
46 chr1:220413800-220422800 Weak transcription Muscle Satellite Cultured Cells --
47 chr1:220413800-220425200 Weak transcription Skeletal Muscle Male skeletal muscle
48 chr1:220415400-220420400 Weak transcription Primary T helper naive cells fromperipheralblood blood
49 chr1:220415800-220421600 Weak transcription Brain Cingulate Gyrus brain
50 chr1:220416000-220442600 Weak transcription Fetal Heart heart

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Last update: Aug 31, 2015