The 2.0 version of rSNPBase

Variant report

Variant rs2811590
Chromosome Location chr1:93367166-93367167
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:34 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93363600-93369400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
2 chr1:93364000-93368800 Weak transcription Primary T regulatory cells fromperipheralblood blood
3 chr1:93364000-93373000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr1:93364600-93375200 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr1:93365000-93373800 Weak transcription Primary T cells fromperipheralblood blood
6 chr1:93365800-93367200 Weak transcription Primary B cells from cord blood blood
7 chr1:93365800-93367400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
8 chr1:93365800-93374600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr1:93366000-93368800 Weak transcription Fetal Adrenal Gland Adrenal Gland
10 chr1:93366000-93369000 Weak transcription Primary T killer naive cells fromperipheralblood blood
11 chr1:93366200-93369400 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr1:93366400-93368000 Weak transcription Primary T helper cells fromperipheralblood blood
13 chr1:93366400-93368600 Strong transcription Primary B cells from peripheral blood blood
14 chr1:93366400-93369000 Weak transcription Primary T helper naive cells fromperipheralblood blood
15 chr1:93366400-93373800 Weak transcription Liver Liver
16 chr1:93366400-93409200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
17 chr1:93366600-93368000 Genic enhancers Thymus Thymus
18 chr1:93366600-93375000 Weak transcription Brain Angular Gyrus brain
19 chr1:93366800-93367200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr1:93366800-93367200 Weak transcription Primary T cells from cord blood blood
21 chr1:93366800-93367400 Genic enhancers Fetal Thymus thymus
22 chr1:93366800-93368000 Strong transcription Aorta Aorta
23 chr1:93366800-93368400 Strong transcription Dnd41 blood
24 chr1:93366800-93369000 Weak transcription Primary T helper cells PMA-I stimulated --
25 chr1:93366800-93369400 Weak transcription Stomach Smooth Muscle stomach
26 chr1:93367000-93367600 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
27 chr1:93367000-93367600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
28 chr1:93367000-93367600 Enhancers Brain Cingulate Gyrus brain
29 chr1:93367000-93367600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
30 chr1:93367000-93367800 Enhancers Fetal Muscle Trunk muscle
31 chr1:93367000-93367800 Enhancers HSMMtube muscle
32 chr1:93367000-93368200 Strong transcription Breast Myoepithelial Primary Cells Breast
33 chr1:93367000-93368400 ZNF genes & repeats Fetal Stomach stomach
34 chr1:93367000-93390400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood

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Last update: Aug 31, 2015