The 2.0 version of rSNPBase

Variant report

Variant rs2811596
Chromosome Location chr1:93341223-93341224
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93304400-93349000 Weak transcription Aorta Aorta
2 chr1:93309800-93342400 Weak transcription NHLF lung
3 chr1:93316000-93342800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr1:93320400-93342000 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr1:93325000-93342800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
6 chr1:93325000-93343000 Weak transcription Duodenum Smooth Muscle Duodenum
7 chr1:93325200-93342800 Weak transcription Liver Liver
8 chr1:93325200-93343600 Weak transcription Stomach Smooth Muscle stomach
9 chr1:93325200-93348400 Weak transcription NHEK skin
10 chr1:93325400-93342000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
11 chr1:93325400-93343400 Weak transcription Duodenum Mucosa Duodenum
12 chr1:93325600-93343200 Weak transcription HSMMtube muscle
13 chr1:93328600-93342600 Weak transcription NHDF-Ad bronchial
14 chr1:93333000-93348600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr1:93333600-93343000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
16 chr1:93335400-93343000 Weak transcription Skeletal Muscle Female skeletal muscle
17 chr1:93335600-93342400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
18 chr1:93335800-93348400 Weak transcription HUES6 Cell Line embryonic stem cell
19 chr1:93336400-93348800 Weak transcription Left Ventricle heart
20 chr1:93336600-93342000 Weak transcription Primary T killer naive cells fromperipheralblood blood
21 chr1:93336600-93342000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
22 chr1:93336600-93349200 Weak transcription HepG2 liver
23 chr1:93337000-93348400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr1:93337400-93341600 Strong transcription Primary B cells from cord blood blood
25 chr1:93337800-93345200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
26 chr1:93338000-93341400 Strong transcription Primary T helper cells PMA-I stimulated --
27 chr1:93338400-93342400 Weak transcription Brain Germinal Matrix brain
28 chr1:93338400-93343000 Weak transcription Adipose Nuclei Adipose
29 chr1:93338600-93343200 Weak transcription Colon Smooth Muscle Colon
30 chr1:93338800-93341800 Weak transcription Brain Cingulate Gyrus brain
31 chr1:93338800-93342000 Weak transcription Thymus Thymus
32 chr1:93338800-93342200 Weak transcription Primary T helper naive cells from peripheral blood blood
33 chr1:93338800-93342600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr1:93338800-93347800 Weak transcription HMEC breast
35 chr1:93338800-93348200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr1:93338800-93348400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr1:93339000-93341800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
38 chr1:93339000-93343000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr1:93339000-93345000 Weak transcription A549 lung
40 chr1:93339000-93348200 Weak transcription Monocytes-CD14+_RO01746 blood
41 chr1:93339000-93352600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
42 chr1:93339200-93341600 Weak transcription Placenta Placenta
43 chr1:93339400-93342000 Weak transcription Cortex derived primary cultured neurospheres brain
44 chr1:93339400-93342600 Weak transcription Fetal Stomach stomach
45 chr1:93339800-93341400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
46 chr1:93339800-93341800 Enhancers Brain Substantia Nigra brain
47 chr1:93339800-93343000 Weak transcription Skeletal Muscle Male skeletal muscle
48 chr1:93340400-93341800 Weak transcription Brain Anterior Caudate brain
49 chr1:93340400-93343000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr1:93340600-93341800 Weak transcription Fetal Thymus thymus

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Last update: Aug 31, 2015