Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs11572717	1.00[JPT][hapmap]
rs11572754	1.00[JPT][hapmap]
rs11572785	1.00[JPT][hapmap]
rs12144183	0.88[YRI][hapmap]
rs13375077	1.00[JPT][hapmap]
rs1339351	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs1339357	1.00[JPT][hapmap]
rs1361333	1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs1361334	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1416616	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1416617	1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs17043116	1.00[JPT][hapmap]
rs1934153	1.00[CHB][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2789729	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2813696	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2813697	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2813698	1.00[CHB][hapmap]
rs2813701	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs2813709	1.00[JPT][hapmap]
rs6661678	1.00[JPT][hapmap]
rs6693114	1.00[JPT][hapmap]
rs6699811	1.00[JPT][hapmap]
rs6700565	1.00[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv508694	chr1:216901014-216923883	Enhancers Flanking Active TSS Weak transcription Active TSS	TF binding region Chromatin interactive region	2 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:216897400-216958600	Weak transcription	Pancreas	Pancrea
2	chr1:216903400-216904800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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