The 2.0 version of rSNPBase

Variant report

Variant rs2818162
Chromosome Location chr1:94233243-94233244
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94220000-94254200 Weak transcription Aorta Aorta
2 chr1:94223000-94237000 Weak transcription NHEK skin
3 chr1:94225000-94233600 Weak transcription Right Atrium heart
4 chr1:94225600-94233600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr1:94225600-94233800 Weak transcription Fetal Lung lung
6 chr1:94227200-94233600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr1:94228200-94233800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr1:94229400-94234600 Enhancers Primary Natural Killer cells fromperipheralblood blood
9 chr1:94229800-94233600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr1:94229800-94234200 Weak transcription Pancreas Pancrea
11 chr1:94230600-94233600 Weak transcription Lung lung
12 chr1:94230800-94233800 Weak transcription Fetal Stomach stomach
13 chr1:94230800-94234000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
14 chr1:94231600-94233800 Enhancers Primary T cells from cord blood blood
15 chr1:94231600-94233800 Enhancers Primary T cells fromperipheralblood blood
16 chr1:94231600-94236000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chr1:94231600-94236200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr1:94231600-94236200 Enhancers Fetal Thymus thymus
19 chr1:94231800-94233800 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr1:94231800-94234200 Enhancers HepG2 liver
21 chr1:94232000-94233600 Weak transcription Primary hematopoietic stem cells short term culture blood
22 chr1:94232000-94233600 Weak transcription Brain Substantia Nigra brain
23 chr1:94232000-94233800 Weak transcription ES-I3 Cell Line embryonic stem cell
24 chr1:94232200-94233400 Weak transcription Primary T helper cells fromperipheralblood blood
25 chr1:94232200-94233400 Weak transcription Placenta Placenta
26 chr1:94232200-94233600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr1:94232200-94233600 Weak transcription Adipose Nuclei Adipose
28 chr1:94232200-94233600 Weak transcription Fetal Muscle Trunk muscle
29 chr1:94232200-94233600 Weak transcription Fetal Muscle Leg muscle
30 chr1:94232200-94233600 Strong transcription HMEC breast
31 chr1:94232400-94233400 Enhancers Primary T helper cells PMA-I stimulated --
32 chr1:94232400-94233600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
33 chr1:94232400-94233600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
34 chr1:94232400-94233600 Weak transcription Fetal Intestine Small intestine
35 chr1:94232600-94233800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr1:94232600-94234200 Weak transcription HUES6 Cell Line embryonic stem cell
37 chr1:94232800-94233600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
38 chr1:94232800-94233600 Weak transcription Primary T helper naive cells fromperipheralblood blood
39 chr1:94232800-94233800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr1:94232800-94233800 Weak transcription HUES64 Cell Line embryonic stem cell
41 chr1:94232800-94233800 Weak transcription Primary T helper naive cells from peripheral blood blood
42 chr1:94232800-94233800 Weak transcription Fetal Kidney kidney
43 chr1:94232800-94233800 Weak transcription Thymus Thymus
44 chr1:94232800-94234000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
45 chr1:94233000-94233400 Weak transcription Breast Myoepithelial Primary Cells Breast
46 chr1:94233000-94233400 Weak transcription Fetal Intestine Large intestine
47 chr1:94233000-94234000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr1:94233200-94233600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015