Variant report
Variant | rs2820540 |
---|---|
Chromosome Location | chr1:71241415-71241416 |
allele | G/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr1:71240165..71242218-chr1:71510173..71512188,2 | K562 | blood: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10889891 | 1.00[EUR][1000 genomes];0.83[ASN][1000 genomes] |
rs10889892 | 0.83[EUR][1000 genomes] |
rs11209705 | 0.81[ASN][1000 genomes] |
rs11579908 | 0.81[ASN][1000 genomes] |
rs11803673 | 0.83[EUR][1000 genomes];0.83[ASN][1000 genomes] |
rs11810467 | 0.81[ASN][1000 genomes] |
rs12026456 | 0.81[ASN][1000 genomes] |
rs12040186 | 1.00[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs12049445 | 0.81[ASN][1000 genomes] |
rs12049500 | 0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs1335002 | 0.91[ASN][1000 genomes] |
rs1591386 | 0.93[ASN][1000 genomes] |
rs17131473 | 1.00[EUR][1000 genomes] |
rs1889598 | 1.00[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs1932050 | 1.00[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs2152121 | 1.00[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs2152122 | 0.83[AFR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs2782768 | 1.00[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs2782769 | 0.92[ASN][1000 genomes] |
rs2782770 | 0.93[ASN][1000 genomes] |
rs2820541 | 1.00[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs2820542 | 1.00[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs34087524 | 1.00[EUR][1000 genomes] |
rs34745168 | 1.00[EUR][1000 genomes] |
rs35615554 | 1.00[EUR][1000 genomes] |
rs4320734 | 0.85[ASN][1000 genomes] |
rs55884889 | 1.00[EUR][1000 genomes] |
rs74086786 | 0.83[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs74086973 | 1.00[EUR][1000 genomes] |
rs915220 | 1.00[EUR][1000 genomes];0.93[ASN][1000 genomes] |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr1:71238800-71243400 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |