Variant report

Variant	rs2836929
Chromosome Location	chr21:40543811-40543812
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr21:40539973..40543967-chr21:40547698..40550109,4	MCF-7	breast:
2	chr21:40177627..40180426-chr21:40542526..40544967,2	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-PSMG1-10	chr21:40543056-40544032	NONHSAT082151

Variant related genes	Relation type
ENSG00000157557	Chromatin interaction

Extended variants
information (count: 142 )
Associated
traits (count: 12 )

rSNPs within LD-proxies of this variant (count:140)

rs_ID	r²[population]
rs1041440	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs10427502	0.83[AMR][1000 genomes]
rs1065242	0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs11088471	0.95[YRI][hapmap]
rs11910151	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs11911112	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11911149	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12481860	0.94[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12482156	0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12482181	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.93[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12482857	0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12483216	0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12710453	0.80[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs13047550	0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs13048178	0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs13049280	0.91[CEU][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs13052882	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs13339986	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.89[EUR][1000 genomes]
rs13625	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];0.94[MEX][hapmap];1.00[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.84[AMR][1000 genomes]
rs14194	1.00[ASW][hapmap];0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1541102	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];0.94[MEX][hapmap];1.00[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.89[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1571709	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1888488	0.92[ASW][hapmap];0.86[YRI][hapmap]
rs1984022	1.00[CEU][hapmap];1.00[YRI][hapmap];0.94[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2026265	1.00[CEU][hapmap];1.00[YRI][hapmap];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2026267	0.84[CEU][hapmap];0.86[GIH][hapmap];1.00[JPT][hapmap];0.81[MEX][hapmap]
rs2037925	0.92[ASW][hapmap];0.86[YRI][hapmap]
rs2142111	0.85[YRI][hapmap]
rs2150413	0.85[ASW][hapmap];0.89[YRI][hapmap]
rs2150414	0.85[ASW][hapmap];0.89[YRI][hapmap]
rs2150415	1.00[ASW][hapmap];0.95[CEU][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];0.97[LWK][hapmap];0.88[MEX][hapmap];1.00[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.86[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2234543	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];0.88[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2245455	0.92[ASW][hapmap];0.83[MEX][hapmap];0.81[YRI][hapmap]
rs2249651	1.00[JPT][hapmap]
rs2410123	0.92[ASW][hapmap];0.96[YRI][hapmap]
rs2735306	0.88[CEU][hapmap];0.86[GIH][hapmap];1.00[JPT][hapmap];0.82[MEX][hapmap]
rs2776307	0.88[CEU][hapmap];0.86[GIH][hapmap];1.00[JPT][hapmap];0.82[MEX][hapmap]
rs2776309	0.88[CEU][hapmap];0.86[GIH][hapmap];1.00[JPT][hapmap]
rs2836920	0.84[CEU][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.92[TSI][hapmap];0.80[ASN][1000 genomes]
rs2836921	0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2836923	0.94[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2836924	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2836925	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2836927	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2836928	1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2836932	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2836933	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs2836938	0.82[AFR][1000 genomes];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2836944	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2836953	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2836955	0.96[CEU][hapmap];1.00[JPT][hapmap];0.84[EUR][1000 genomes]
rs2836956	0.85[ASW][hapmap];0.89[YRI][hapmap]
rs2836957	0.96[CEU][hapmap];0.82[JPT][hapmap];1.00[YRI][hapmap];0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2836958	0.85[ASW][hapmap];0.89[YRI][hapmap]
rs2836964	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];0.94[MEX][hapmap];1.00[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.89[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2836965	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];0.88[MEX][hapmap];1.00[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2836967	0.96[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2836968	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];0.94[MEX][hapmap];1.00[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2836972	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2836973	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2836974	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];0.88[MEX][hapmap];1.00[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.80[AMR][1000 genomes]
rs2836977	0.84[AMR][1000 genomes]
rs2836981	0.92[ASW][hapmap];0.85[YRI][hapmap]
rs2836982	0.92[ASW][hapmap];0.85[YRI][hapmap]
rs2836985	0.85[ASW][hapmap]
rs2836986	0.96[YRI][hapmap]
rs2836987	0.92[ASW][hapmap];0.96[YRI][hapmap]
rs2836988	0.92[ASW][hapmap];0.86[YRI][hapmap]
rs34035316	0.93[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs34176878	0.90[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34294410	0.87[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs34394827	0.94[AFR][1000 genomes];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34433511	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs34478864	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34592564	0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs34672724	0.82[AMR][1000 genomes]
rs34978594	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs35064900	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs35068861	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs35386515	0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35391055	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35560196	0.82[AMR][1000 genomes]
rs35571600	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs35774464	0.89[EUR][1000 genomes]
rs36113648	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs3945	1.00[CEU][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs418298	0.84[MEX][hapmap]
rs418359	0.84[MEX][hapmap]
rs419469	0.84[MEX][hapmap]
rs428602	0.89[YRI][hapmap]
rs4624474	0.92[ASW][hapmap];0.86[YRI][hapmap]
rs4817996	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55836299	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs56049536	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs56112725	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs56306759	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs6517513	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6517514	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6517519	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6517521	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6517523	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.97[LWK][hapmap];0.88[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs6517526	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.97[LWK][hapmap];0.88[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.91[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6517527	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6517533	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs6517538	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.92[LWK][hapmap];0.88[MEX][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs66465538	0.83[EUR][1000 genomes]
rs68004583	0.83[AMR][1000 genomes]
rs68090597	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71184665	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7278297	0.89[YRI][hapmap]
rs7280375	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7281853	0.92[ASW][hapmap];0.85[YRI][hapmap]
rs7282604	0.84[MEX][hapmap]
rs7282624	0.84[AMR][1000 genomes]
rs7283516	0.92[CEU][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap]
rs7283569	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs73221174	0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs73221193	0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7354783	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs8127087	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8128026	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8128102	1.00[CEU][hapmap];0.96[YRI][hapmap];0.91[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs8128191	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8128620	0.84[AMR][1000 genomes]
rs8128734	0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs8128894	0.82[AMR][1000 genomes]
rs8129355	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs8129416	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs8130556	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs8130984	0.95[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs8131965	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs8132285	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs8132295	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];1.00[TSI][hapmap];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8132333	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];1.00[TSI][hapmap];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8132419	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8132568	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8133146	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs8134733	0.80[AMR][1000 genomes]
rs9941894	0.96[CEU][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.97[TSI][hapmap];0.82[EUR][1000 genomes]
rs9981301	0.85[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1061831	chr21:40376316-40583555	Enhancers Strong transcription Weak transcription Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
2	nsv544443	chr21:40376316-40583555	Enhancers Flanking Active TSS Weak transcription Active TSS Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases

mRNA abundance (count:12)

SNP	Gene	Cis/trans	Tissue	Source
rs2836929	HMGN1	cis	lymphoblastoid	seeQTL
rs2836929	CLIC6	cis	parietal	SCAN
rs2836929	PSMG1	cis	lymphoblastoid	seeQTL
rs2836929	PSMG1	cis	Muscle Skeletal	GTEx
rs2836929	DSCR2	cis	normal skin	skin_eQTL
rs2836929	BRWD1	cis	cerebellum	SCAN
rs2836929	PSMG1	cis	parietal	SCAN
rs2836929	PSMG1	cis	Skin Sun Exposed Lower leg	GTEx
rs2836929	PSMG1	cis	Esophagus Mucosa	GTEx
rs2836929	PIGP	cis	parietal	SCAN
rs2836929	DSCR3	cis	cerebellum	SCAN
rs2836929	BRWD1	cis	parietal	SCAN

Chromatin state (count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:40533600-40545400	Weak transcription	HUVEC	blood vessel
2	chr21:40537600-40553800	Weak transcription	Pancreatic Islets	Pancreatic Islet
3	chr21:40538400-40544800	Weak transcription	H1 Cell Line	embryonic stem cell
4	chr21:40538800-40545200	Weak transcription	Primary T cells fromperipheralblood	blood
5	chr21:40538800-40550400	Weak transcription	Placenta Amnion	Placenta Amnion
6	chr21:40539000-40550800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
7	chr21:40539400-40544800	Weak transcription	NHDF-Ad	bronchial
8	chr21:40539400-40545200	Weak transcription	Primary B cells from peripheral blood	blood
9	chr21:40539600-40554000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
10	chr21:40539800-40554000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
11	chr21:40540200-40554200	Weak transcription	Psoas Muscle	Psoas
12	chr21:40541000-40544000	Strong transcription	HSMM	muscle
13	chr21:40541000-40547000	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr21:40541000-40547600	Weak transcription	Primary monocytes fromperipheralblood	blood
15	chr21:40541200-40544000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
16	chr21:40541200-40544000	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
17	chr21:40541200-40544000	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
18	chr21:40541200-40544400	Strong transcription	Skeletal Muscle Female	skeletal muscle
19	chr21:40541200-40545400	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
20	chr21:40541200-40545600	Weak transcription	Fetal Lung	lung
21	chr21:40541200-40546400	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
22	chr21:40541200-40546400	Strong transcription	Adipose Nuclei	Adipose
23	chr21:40541200-40546400	Strong transcription	Fetal Muscle Leg	muscle
24	chr21:40541200-40546600	Strong transcription	Breast Myoepithelial Primary Cells	Breast
25	chr21:40541200-40546600	Strong transcription	Thymus	Thymus
26	chr21:40541200-40547800	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
27	chr21:40541200-40548400	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
28	chr21:40541200-40550600	Strong transcription	Dnd41	blood
29	chr21:40541200-40552600	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
30	chr21:40541200-40552800	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
31	chr21:40541200-40553000	Strong transcription	HUES48 Cell Line	embryonic stem cell
32	chr21:40541200-40553000	Strong transcription	HUES6 Cell Line	embryonic stem cell
33	chr21:40541200-40553600	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
34	chr21:40541200-40553800	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
35	chr21:40541200-40554000	Weak transcription	Brain Substantia Nigra	brain
36	chr21:40541400-40544000	Strong transcription	iPS-20b Cell Line	embryonic stem cell
37	chr21:40541400-40545400	Strong transcription	Primary hematopoietic stem cells short term culture	blood
38	chr21:40541400-40545400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
39	chr21:40541400-40545800	Weak transcription	Brain Angular Gyrus	brain
40	chr21:40541400-40546400	Strong transcription	Fetal Stomach	stomach
41	chr21:40541400-40546800	Strong transcription	A549	lung
42	chr21:40541400-40553000	Strong transcription	HUES64 Cell Line	embryonic stem cell
43	chr21:40541600-40545400	Weak transcription	Hela-S3	cervix
44	chr21:40541600-40545800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
45	chr21:40541600-40553800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
46	chr21:40541600-40554000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
47	chr21:40541600-40554000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
48	chr21:40541600-40554000	Weak transcription	Colon Smooth Muscle	Colon
49	chr21:40541800-40545400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
50	chr21:40541800-40545800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--

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