The 2.0 version of rSNPBase

Variant report

Variant rs28377694
Chromosome Location chr12:123884070-123884071
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:123875000-123884400 Strong transcription Thymus Thymus
2 chr12:123875000-123886400 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr12:123875200-123884400 Strong transcription HUES6 Cell Line embryonic stem cell
4 chr12:123875200-123884600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr12:123875200-123894400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr12:123875400-123884600 Strong transcription Primary T cells from cord blood blood
7 chr12:123875600-123884200 Strong transcription Primary T helper naive cells fromperipheralblood blood
8 chr12:123875600-123884200 Strong transcription A549 lung
9 chr12:123875600-123884200 Strong transcription GM12878-XiMat blood
10 chr12:123875600-123884400 Strong transcription HMEC breast
11 chr12:123875600-123884600 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr12:123875600-123885400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr12:123875600-123894200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr12:123875600-123895600 Strong transcription Fetal Thymus thymus
15 chr12:123875800-123884200 Strong transcription Primary B cells from peripheral blood blood
16 chr12:123875800-123884600 Strong transcription Placenta Amnion Placenta Amnion
17 chr12:123875800-123894000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr12:123876000-123884400 Strong transcription Primary T regulatory cells fromperipheralblood blood
19 chr12:123876200-123884400 Strong transcription Fetal Lung lung
20 chr12:123876200-123885600 Strong transcription Primary hematopoietic stem cells short term culture blood
21 chr12:123876400-123884600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr12:123876400-123894800 Strong transcription Fetal Intestine Small intestine
23 chr12:123876600-123894800 Strong transcription Fetal Adrenal Gland Adrenal Gland
24 chr12:123876800-123884200 Strong transcription K562 blood
25 chr12:123876800-123884400 Strong transcription Primary T helper cells fromperipheralblood blood
26 chr12:123876800-123884400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
27 chr12:123876800-123885400 Strong transcription Fetal Brain Female brain
28 chr12:123876800-123887600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
29 chr12:123877000-123885000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr12:123877000-123885600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr12:123877200-123884400 Strong transcription Brain Germinal Matrix brain
32 chr12:123877400-123884400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
33 chr12:123877400-123889000 Weak transcription Fetal Heart heart
34 chr12:123877400-123895600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
35 chr12:123877800-123884400 Strong transcription Monocytes-CD14+_RO01746 blood
36 chr12:123878000-123884400 Strong transcription Primary monocytes fromperipheralblood blood
37 chr12:123878200-123884600 Strong transcription Primary neutrophils fromperipheralblood blood
38 chr12:123879000-123884200 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
39 chr12:123879000-123884400 Strong transcription Primary T helper cells PMA-I stimulated --
40 chr12:123879000-123884600 Strong transcription Sigmoid Colon Sigmoid Colon
41 chr12:123879600-123884600 Strong transcription Dnd41 blood
42 chr12:123880600-123884200 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr12:123881000-123884200 Genic enhancers Brain Substantia Nigra brain
44 chr12:123881200-123884400 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
45 chr12:123881400-123886400 Weak transcription ES-I3 Cell Line embryonic stem cell
46 chr12:123881600-123884800 Strong transcription Fetal Intestine Large intestine
47 chr12:123881600-123887200 Weak transcription Small Intestine intestine
48 chr12:123881600-123888200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
49 chr12:123881600-123888400 Weak transcription Primary T killer naive cells fromperipheralblood blood
50 chr12:123881600-123888600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015