Variant report

Variant rs28384426
Chromosome Location chr13:111267758-111267759
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:111265200-111267800 Weak transcription Placenta Amnion Placenta Amnion
2 chr13:111267000-111267800 ZNF genes & repeats Fetal Intestine Small intestine
3 chr13:111267000-111267800 Flanking Active TSS Dnd41 blood
4 chr13:111267000-111269000 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
5 chr13:111267200-111267800 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
6 chr13:111267200-111267800 Flanking Active TSS Brain Hippocampus Middle brain
7 chr13:111267200-111267800 Flanking Active TSS Brain Inferior Temporal Lobe brain
8 chr13:111267200-111267800 Enhancers Fetal Heart heart
9 chr13:111267200-111267800 Flanking Active TSS Stomach Smooth Muscle stomach
10 chr13:111267200-111267800 Enhancers Spleen Spleen
11 chr13:111267200-111267800 Flanking Active TSS GM12878-XiMat blood
12 chr13:111267200-111267800 Flanking Active TSS HepG2 liver
13 chr13:111267200-111268000 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
14 chr13:111267200-111268000 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr13:111267200-111268600 Active TSS Brain Dorsolateral Prefrontal Cortex brain
16 chr13:111267200-111268800 Active TSS HUES48 Cell Line embryonic stem cell
17 chr13:111267200-111268800 Active TSS Brain Anterior Caudate brain
18 chr13:111267200-111268800 Active TSS HSMMtube muscle
19 chr13:111267200-111268800 Active TSS NHLF lung
20 chr13:111267200-111269000 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
21 chr13:111267200-111269000 Active TSS Rectal Smooth Muscle rectum
22 chr13:111267200-111269400 Active TSS A549 lung
23 chr13:111267200-111270000 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr13:111267400-111267800 Flanking Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr13:111267400-111267800 Flanking Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr13:111267400-111267800 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr13:111267400-111267800 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
28 chr13:111267400-111267800 Flanking Active TSS HUES6 Cell Line embryonic stem cell
29 chr13:111267400-111267800 Flanking Active TSS iPS DF 19.11 Cell Line embryonic stem cell
30 chr13:111267400-111267800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
31 chr13:111267400-111267800 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr13:111267400-111267800 Flanking Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr13:111267400-111267800 ZNF genes & repeats Primary monocytes fromperipheralblood blood
34 chr13:111267400-111267800 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
35 chr13:111267400-111267800 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
36 chr13:111267400-111267800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
37 chr13:111267400-111267800 Flanking Active TSS Primary T helper cells fromperipheralblood blood
38 chr13:111267400-111267800 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
39 chr13:111267400-111267800 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
40 chr13:111267400-111267800 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr13:111267400-111267800 Flanking Active TSS Muscle Satellite Cultured Cells --
42 chr13:111267400-111267800 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr13:111267400-111267800 Flanking Active TSS Adipose Nuclei Adipose
44 chr13:111267400-111267800 Flanking Active TSS Brain Cingulate Gyrus brain
45 chr13:111267400-111267800 Flanking Active TSS Brain Substantia Nigra brain
46 chr13:111267400-111267800 Flanking Active TSS Duodenum Mucosa Duodenum
47 chr13:111267400-111267800 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
48 chr13:111267400-111267800 Flanking Active TSS Fetal Kidney kidney
49 chr13:111267400-111267800 Flanking Bivalent TSS/Enh Fetal Muscle Trunk muscle
50 chr13:111267400-111267800 Flanking Active TSS Fetal Muscle Leg muscle

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