The 2.0 version of rSNPBase

Variant report

Variant rs28390205
Chromosome Location chr3:136364850-136364851
allele A/C/G
Outlinks Ensembl   UCSC
Chromatin state (count:34 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:136347200-136368400 Weak transcription Fetal Intestine Small intestine
2 chr3:136347600-136367200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
3 chr3:136348200-136365000 Weak transcription Primary T cells fromperipheralblood blood
4 chr3:136348800-136373600 Weak transcription Thymus Thymus
5 chr3:136349800-136372400 Weak transcription Dnd41 blood
6 chr3:136350600-136372200 Weak transcription Primary T cells from cord blood blood
7 chr3:136351600-136376200 Weak transcription Esophagus oesophagus
8 chr3:136352400-136371600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr3:136352400-136371600 Weak transcription Primary T helper cells fromperipheralblood blood
10 chr3:136352400-136371800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr3:136357800-136368200 Weak transcription Lung lung
12 chr3:136357800-136387400 Weak transcription Fetal Thymus thymus
13 chr3:136361400-136366200 Weak transcription Fetal Stomach stomach
14 chr3:136363600-136365000 Enhancers Ovary ovary
15 chr3:136363600-136365200 Enhancers Psoas Muscle Psoas
16 chr3:136363600-136365400 Enhancers Primary T killer naive cells fromperipheralblood blood
17 chr3:136364000-136365000 Enhancers Primary T helper 17 cells PMA-I stimulated --
18 chr3:136364000-136365000 Enhancers Small Intestine intestine
19 chr3:136364000-136366200 Enhancers Primary T helper cells PMA-I stimulated --
20 chr3:136364200-136365200 Flanking Active TSS GM12878-XiMat blood
21 chr3:136364200-136368000 Weak transcription Primary T regulatory cells fromperipheralblood blood
22 chr3:136364400-136369400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
23 chr3:136364600-136365000 Enhancers Breast Myoepithelial Primary Cells Breast
24 chr3:136364600-136365000 Enhancers Gastric stomach
25 chr3:136364600-136365200 Enhancers Primary T helper naive cells fromperipheralblood blood
26 chr3:136364600-136365200 Enhancers Right Ventricle heart
27 chr3:136364600-136371800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr3:136364800-136365000 Enhancers Skeletal Muscle Male skeletal muscle
29 chr3:136364800-136365200 Enhancers Primary B cells from peripheral blood blood
30 chr3:136364800-136365200 Enhancers Pancreas Pancrea
31 chr3:136364800-136365200 Enhancers K562 blood
32 chr3:136364800-136368000 Weak transcription Primary T killer memory cells from peripheral blood blood
33 chr3:136364800-136372200 Weak transcription Primary hematopoietic stem cells short term culture blood
34 chr3:136364800-136377800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015