Variant report

Variant rs28416808
Chromosome Location chr17:44021218-44021219
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:34 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:44016600-44021600 Enhancers Brain Anterior Caudate brain
2 chr17:44016800-44021600 Enhancers Liver Liver
3 chr17:44017000-44022600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
4 chr17:44017400-44021600 Enhancers Cortex derived primary cultured neurospheres brain
5 chr17:44017800-44021600 Enhancers Adipose Nuclei Adipose
6 chr17:44018200-44021400 Enhancers Brain Hippocampus Middle brain
7 chr17:44018600-44021600 Enhancers Brain Cingulate Gyrus brain
8 chr17:44018600-44026000 Weak transcription Breast Myoepithelial Primary Cells Breast
9 chr17:44018800-44025800 Weak transcription Rectal Smooth Muscle rectum
10 chr17:44019600-44022000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
11 chr17:44019600-44022000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
12 chr17:44019800-44021400 Enhancers ES-I3 Cell Line embryonic stem cell
13 chr17:44020000-44021400 Genic enhancers Brain Germinal Matrix brain
14 chr17:44020000-44026000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
15 chr17:44020000-44031400 Enhancers Brain Angular Gyrus brain
16 chr17:44020200-44021600 Weak transcription Gastric stomach
17 chr17:44020200-44022000 Enhancers Left Ventricle heart
18 chr17:44020200-44024400 Weak transcription iPS-20b Cell Line embryonic stem cell
19 chr17:44020200-44025800 Weak transcription Stomach Smooth Muscle stomach
20 chr17:44020400-44021800 Enhancers Skeletal Muscle Male skeletal muscle
21 chr17:44020400-44022600 Enhancers Skeletal Muscle Female skeletal muscle
22 chr17:44020400-44025800 Weak transcription Colon Smooth Muscle Colon
23 chr17:44020400-44025800 Weak transcription Fetal Brain Male brain
24 chr17:44020400-44026000 Weak transcription H9 Cell Line embryonic stem cell
25 chr17:44020600-44021600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
26 chr17:44020800-44026000 Weak transcription H1 Cell Line embryonic stem cell
27 chr17:44021000-44021800 Enhancers Right Ventricle heart
28 chr17:44021000-44024000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr17:44021200-44022400 Genic enhancers Brain Inferior Temporal Lobe brain
30 chr17:44021200-44022600 Strong transcription Fetal Brain Female brain
31 chr17:44021200-44022600 Enhancers Psoas Muscle Psoas
32 chr17:44021200-44024400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr17:44021200-44024800 Enhancers Brain Substantia Nigra brain
34 chr17:44021200-44026200 Weak transcription Right Atrium heart

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