The 2.0 version of rSNPBase

Variant report

Variant rs28430450
Chromosome Location chr2:37437611-37437612
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:37424400-37446400 Weak transcription Small Intestine intestine
2 chr2:37425000-37444200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr2:37426200-37438200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr2:37426600-37438200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr2:37426600-37451400 Strong transcription Fetal Thymus thymus
6 chr2:37427200-37441200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr2:37427600-37439600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
8 chr2:37427800-37451400 Strong transcription Rectal Mucosa Donor 29 rectum
9 chr2:37428000-37439600 Strong transcription Primary neutrophils fromperipheralblood blood
10 chr2:37429000-37449200 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr2:37429400-37449000 Strong transcription Primary T regulatory cells fromperipheralblood blood
12 chr2:37429800-37452600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
13 chr2:37430200-37438200 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
14 chr2:37430600-37437800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr2:37430800-37437800 ZNF genes & repeats Brain Germinal Matrix brain
16 chr2:37431200-37438400 Weak transcription ES-WA7 Cell Line embryonic stem cell
17 chr2:37431200-37438600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr2:37431200-37440200 Strong transcription Rectal Mucosa Donor 31 rectum
19 chr2:37431200-37441200 Strong transcription Adipose Nuclei Adipose
20 chr2:37431200-37442400 Strong transcription Muscle Satellite Cultured Cells --
21 chr2:37431200-37450600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr2:37431200-37450600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr2:37431200-37452400 Strong transcription Dnd41 blood
24 chr2:37431400-37450800 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
25 chr2:37432400-37444600 Strong transcription Placenta Amnion Placenta Amnion
26 chr2:37432800-37440400 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
27 chr2:37433000-37439800 Strong transcription Primary T helper memory cells from peripheral blood 2 blood
28 chr2:37433000-37451600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
29 chr2:37433200-37437800 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
30 chr2:37433200-37450600 Strong transcription Skeletal Muscle Female skeletal muscle
31 chr2:37433400-37438400 ZNF genes & repeats ES-I3 Cell Line embryonic stem cell
32 chr2:37433400-37439200 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
33 chr2:37433600-37437800 Weak transcription NHEK skin
34 chr2:37433800-37437800 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
35 chr2:37433800-37437800 Strong transcription Ovary ovary
36 chr2:37433800-37440000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr2:37433800-37440000 Weak transcription Esophagus oesophagus
38 chr2:37433800-37440600 Weak transcription Lung lung
39 chr2:37433800-37442200 Strong transcription Primary monocytes fromperipheralblood blood
40 chr2:37433800-37444200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr2:37433800-37445800 Strong transcription Placenta Placenta
42 chr2:37433800-37447800 Weak transcription Aorta Aorta
43 chr2:37433800-37447800 Weak transcription Gastric stomach
44 chr2:37433800-37448000 Weak transcription Pancreas Pancrea
45 chr2:37433800-37453600 Weak transcription Spleen Spleen
46 chr2:37434000-37439200 Weak transcription NHLF lung
47 chr2:37434000-37447600 Weak transcription Right Ventricle heart
48 chr2:37434200-37438000 ZNF genes & repeats Primary T cells from cord blood blood
49 chr2:37434200-37452400 Strong transcription Primary B cells from peripheral blood blood
50 chr2:37435200-37438400 ZNF genes & repeats iPS-18 Cell Line embryonic stem cell

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Last update: Aug 31, 2015