Variant report

Variant rs28432011
Chromosome Location chr17:43479610-43479611
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:43463000-43482400 Weak transcription H9 Cell Line embryonic stem cell
2 chr17:43470600-43482400 Strong transcription Rectal Mucosa Donor 29 rectum
3 chr17:43470800-43483000 Strong transcription Lung lung
4 chr17:43470800-43483200 Strong transcription Monocytes-CD14+_RO01746 blood
5 chr17:43470800-43483400 Strong transcription Primary neutrophils fromperipheralblood blood
6 chr17:43470800-43483600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
7 chr17:43471000-43482800 Strong transcription Primary B cells from peripheral blood blood
8 chr17:43471000-43483200 Strong transcription Primary T regulatory cells fromperipheralblood blood
9 chr17:43471000-43484400 Strong transcription Thymus Thymus
10 chr17:43471400-43483000 Strong transcription Primary monocytes fromperipheralblood blood
11 chr17:43471400-43483400 Strong transcription Dnd41 blood
12 chr17:43471600-43483200 Strong transcription Sigmoid Colon Sigmoid Colon
13 chr17:43471600-43483400 Strong transcription Primary T helper cells fromperipheralblood blood
14 chr17:43471600-43483800 Strong transcription Primary T helper naive cells fromperipheralblood blood
15 chr17:43471600-43484600 Strong transcription Primary T cells from cord blood blood
16 chr17:43471800-43483600 Strong transcription Primary T helper 17 cells PMA-I stimulated --
17 chr17:43471800-43483600 Strong transcription GM12878-XiMat blood
18 chr17:43471800-43483800 Strong transcription Primary T helper cells PMA-I stimulated --
19 chr17:43472000-43483200 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
20 chr17:43472400-43483000 Strong transcription Primary hematopoietic stem cells short term culture blood
21 chr17:43472600-43481800 Weak transcription Stomach Mucosa stomach
22 chr17:43472600-43482200 Weak transcription HUES48 Cell Line embryonic stem cell
23 chr17:43472600-43482200 Weak transcription iPS-18 Cell Line embryonic stem cell
24 chr17:43472600-43483000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr17:43472600-43483200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr17:43472600-43484200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr17:43472600-43485600 Weak transcription HSMMtube muscle
28 chr17:43472800-43481600 Strong transcription Primary T cells fromperipheralblood blood
29 chr17:43472800-43481800 Strong transcription Placenta Placenta
30 chr17:43472800-43483000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
31 chr17:43472800-43487400 Weak transcription HUVEC blood vessel
32 chr17:43473000-43480200 Weak transcription Brain Inferior Temporal Lobe brain
33 chr17:43473000-43481000 Weak transcription Brain Angular Gyrus brain
34 chr17:43473000-43481000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
35 chr17:43473000-43482000 Weak transcription HUES6 Cell Line embryonic stem cell
36 chr17:43473000-43482000 Strong transcription Duodenum Mucosa Duodenum
37 chr17:43473000-43482200 Strong transcription Rectal Mucosa Donor 31 rectum
38 chr17:43473000-43483000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr17:43473000-43483000 Weak transcription Fetal Kidney kidney
40 chr17:43473000-43483200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr17:43473000-43483400 Strong transcription Esophagus oesophagus
42 chr17:43473000-43483600 Strong transcription Fetal Thymus thymus
43 chr17:43473000-43483800 Strong transcription Spleen Spleen
44 chr17:43473200-43479800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
45 chr17:43473200-43480000 Weak transcription Skeletal Muscle Female skeletal muscle
46 chr17:43473200-43480800 Weak transcription Skeletal Muscle Male skeletal muscle
47 chr17:43473200-43482200 Strong transcription Colonic Mucosa Colon
48 chr17:43473200-43483000 Weak transcription Brain Substantia Nigra brain
49 chr17:43473200-43483400 Strong transcription Adipose Nuclei Adipose
50 chr17:43473400-43482000 Strong transcription Breast Myoepithelial Primary Cells Breast

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