Variant report

Variant rs28460143
Chromosome Location chr4:10450164-10450165
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:10443200-10457000 ZNF genes & repeats Brain Germinal Matrix brain
2 chr4:10443400-10457000 ZNF genes & repeats Fetal Brain Female brain
3 chr4:10443800-10456400 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr4:10443800-10456800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr4:10444000-10453800 ZNF genes & repeats Primary T cells from cord blood blood
6 chr4:10444200-10450200 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr4:10444600-10450400 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr4:10444600-10451000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr4:10444600-10456600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
10 chr4:10444800-10450400 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
11 chr4:10444800-10451000 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
12 chr4:10444800-10454000 ZNF genes & repeats Fetal Lung lung
13 chr4:10444800-10457000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr4:10445000-10450800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr4:10445200-10450400 ZNF genes & repeats Adipose Nuclei Adipose
16 chr4:10445200-10450800 Strong transcription Muscle Satellite Cultured Cells --
17 chr4:10445200-10454200 ZNF genes & repeats Fetal Muscle Leg muscle
18 chr4:10445200-10454600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr4:10445400-10450400 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr4:10445400-10450400 ZNF genes & repeats Left Ventricle heart
21 chr4:10445400-10454600 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
22 chr4:10445600-10453000 Strong transcription Thymus Thymus
23 chr4:10445800-10450600 ZNF genes & repeats Liver Liver
24 chr4:10445800-10454000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr4:10446000-10451000 ZNF genes & repeats Fetal Intestine Large intestine
26 chr4:10446000-10456600 Strong transcription HSMM muscle
27 chr4:10446200-10453600 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
28 chr4:10446400-10450600 Strong transcription Primary B cells from peripheral blood blood
29 chr4:10446400-10452400 ZNF genes & repeats Sigmoid Colon Sigmoid Colon
30 chr4:10446600-10454000 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
31 chr4:10446800-10450400 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
32 chr4:10446800-10451000 ZNF genes & repeats Stomach Smooth Muscle stomach
33 chr4:10447200-10450200 Strong transcription HUES6 Cell Line embryonic stem cell
34 chr4:10447200-10456800 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
35 chr4:10447800-10450600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr4:10447800-10450600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr4:10447800-10452000 Weak transcription Stomach Mucosa stomach
38 chr4:10447800-10453600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr4:10447800-10455600 Weak transcription Placenta Amnion Placenta Amnion
40 chr4:10448000-10450200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr4:10448000-10450400 Strong transcription A549 lung
42 chr4:10448000-10451200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr4:10448000-10451800 Weak transcription Brain Anterior Caudate brain
44 chr4:10448000-10451800 Weak transcription Skeletal Muscle Female skeletal muscle
45 chr4:10448000-10451800 Weak transcription HMEC breast
46 chr4:10448000-10451800 Weak transcription HUVEC blood vessel
47 chr4:10448000-10453600 Weak transcription Brain Inferior Temporal Lobe brain
48 chr4:10448000-10455600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
49 chr4:10448000-10455600 Weak transcription Right Ventricle heart
50 chr4:10448000-10455800 Weak transcription H1 Cell Line embryonic stem cell

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