Variant report

Variant rs28496610
Chromosome Location chr4:10023228-10023229
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:10020200-10024600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
2 chr4:10020600-10023400 Flanking Active TSS Liver Liver
3 chr4:10021000-10024800 Enhancers Lung lung
4 chr4:10021200-10024200 Enhancers Fetal Stomach stomach
5 chr4:10021200-10025600 Enhancers Primary B cells from cord blood blood
6 chr4:10021200-10025800 Enhancers Fetal Adrenal Gland Adrenal Gland
7 chr4:10021200-10026400 Enhancers Primary Natural Killer cells fromperipheralblood blood
8 chr4:10021200-10027400 Enhancers Right Atrium heart
9 chr4:10021400-10023400 Weak transcription Brain Substantia Nigra brain
10 chr4:10021400-10024200 Weak transcription GM12878-XiMat blood
11 chr4:10021400-10024800 Enhancers Left Ventricle heart
12 chr4:10021400-10025200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr4:10021400-10025200 Weak transcription NH-A brain
14 chr4:10021400-10026200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
15 chr4:10021400-10026200 Enhancers Adipose Nuclei Adipose
16 chr4:10021400-10026400 Enhancers Fetal Muscle Leg muscle
17 chr4:10021400-10029600 Weak transcription A549 lung
18 chr4:10021400-10032000 Weak transcription HSMMtube muscle
19 chr4:10021600-10023800 Weak transcription Brain Anterior Caudate brain
20 chr4:10021600-10023800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
21 chr4:10021600-10023800 Enhancers Stomach Smooth Muscle stomach
22 chr4:10021600-10024000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr4:10021600-10025200 Weak transcription Rectal Mucosa Donor 31 rectum
24 chr4:10021600-10026000 Enhancers Right Ventricle heart
25 chr4:10021600-10026000 Enhancers Skeletal Muscle Female skeletal muscle
26 chr4:10021600-10035200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
27 chr4:10021800-10032000 Weak transcription Fetal Heart heart
28 chr4:10022200-10023400 Flanking Active TSS Primary monocytes fromperipheralblood blood
29 chr4:10022200-10025000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr4:10022200-10025200 Enhancers Spleen Spleen
31 chr4:10022200-10025400 Enhancers Primary hematopoietic stem cells short term culture blood
32 chr4:10022400-10023400 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr4:10022400-10024200 Enhancers Psoas Muscle Psoas
34 chr4:10022600-10023600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
35 chr4:10022600-10023800 Enhancers HUVEC blood vessel
36 chr4:10022600-10024800 Enhancers Primary neutrophils fromperipheralblood blood
37 chr4:10022600-10024800 Enhancers Fetal Thymus thymus
38 chr4:10022600-10025000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr4:10022600-10025800 Enhancers Primary B cells from peripheral blood blood
40 chr4:10022800-10023400 Enhancers Rectal Mucosa Donor 29 rectum
41 chr4:10022800-10024400 Enhancers Brain Hippocampus Middle brain
42 chr4:10023000-10023400 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr4:10023000-10023600 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr4:10023000-10023800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr4:10023000-10024200 Enhancers Primary hematopoietic stem cells blood
46 chr4:10023000-10026000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr4:10023000-10026000 Enhancers Fetal Muscle Trunk muscle
48 chr4:10023000-10026000 Enhancers Skeletal Muscle Male skeletal muscle
49 chr4:10023000-10026400 Enhancers Placenta Placenta
50 chr4:10023000-10030400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin

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