The 2.0 version of rSNPBase

Variant report

Variant rs28503176
Chromosome Location chr13:96480222-96480223
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:96444400-96485600 Weak transcription NHDF-Ad bronchial
2 chr13:96445800-96490000 Weak transcription HepG2 liver
3 chr13:96452000-96490600 Weak transcription Fetal Kidney kidney
4 chr13:96462600-96485600 Weak transcription Hela-S3 cervix
5 chr13:96465600-96481200 Weak transcription Psoas Muscle Psoas
6 chr13:96466200-96480800 Weak transcription Skeletal Muscle Male skeletal muscle
7 chr13:96466200-96481400 Weak transcription Skeletal Muscle Female skeletal muscle
8 chr13:96466400-96485400 Weak transcription NHEK skin
9 chr13:96466400-96486000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr13:96466600-96485800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr13:96466800-96485800 Weak transcription Brain Anterior Caudate brain
12 chr13:96467000-96485200 Weak transcription HUVEC blood vessel
13 chr13:96467400-96490800 Weak transcription Rectal Mucosa Donor 31 rectum
14 chr13:96468200-96489800 Weak transcription GM12878-XiMat blood
15 chr13:96468800-96486000 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr13:96475400-96481200 Weak transcription Rectal Mucosa Donor 29 rectum
17 chr13:96475800-96485600 Weak transcription HMEC breast
18 chr13:96476000-96502600 Weak transcription Fetal Heart heart
19 chr13:96476400-96489800 Weak transcription HUES48 Cell Line embryonic stem cell
20 chr13:96477000-96481200 Weak transcription Brain Substantia Nigra brain
21 chr13:96477400-96486000 Weak transcription HUES64 Cell Line embryonic stem cell
22 chr13:96478000-96485400 Weak transcription A549 lung
23 chr13:96478000-96485600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr13:96478000-96485600 Weak transcription Brain Cingulate Gyrus brain
25 chr13:96478000-96486000 Weak transcription Primary hematopoietic stem cells short term culture blood
26 chr13:96478000-96486000 Weak transcription Adipose Nuclei Adipose
27 chr13:96478000-96498200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr13:96478000-96502600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr13:96478000-96502600 Weak transcription Left Ventricle heart
30 chr13:96478000-96568400 Weak transcription Placenta Placenta
31 chr13:96478200-96480800 Weak transcription Brain Germinal Matrix brain
32 chr13:96478200-96481200 Weak transcription Brain Angular Gyrus brain
33 chr13:96478200-96481800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr13:96478200-96481800 Weak transcription Fetal Lung lung
35 chr13:96478200-96482400 Weak transcription Pancreas Pancrea
36 chr13:96478200-96483000 Weak transcription Duodenum Mucosa Duodenum
37 chr13:96478200-96485200 Weak transcription Muscle Satellite Cultured Cells --
38 chr13:96478200-96485400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr13:96478200-96485600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr13:96478200-96485600 Weak transcription Cortex derived primary cultured neurospheres brain
41 chr13:96478200-96485600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr13:96478200-96485600 Weak transcription NHLF lung
43 chr13:96478200-96485600 Weak transcription Osteobl bone
44 chr13:96478200-96485800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
45 chr13:96478200-96485800 Weak transcription NH-A brain
46 chr13:96478200-96486000 Weak transcription iPS-20b Cell Line embryonic stem cell
47 chr13:96478200-96486000 Weak transcription Brain Inferior Temporal Lobe brain
48 chr13:96478200-96486000 Weak transcription Fetal Adrenal Gland Adrenal Gland
49 chr13:96478200-96486400 Weak transcription Primary monocytes fromperipheralblood blood
50 chr13:96478200-96489200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived

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Last update: Aug 31, 2015