Variant report

Variant rs28513939
Chromosome Location chr9:734854-734855
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:712200-741200 Weak transcription Primary hematopoietic stem cells blood
2 chr9:712800-740400 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr9:713000-740400 Weak transcription Spleen Spleen
4 chr9:713000-740600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr9:713000-743400 Weak transcription Thymus Thymus
6 chr9:713400-735800 Weak transcription Colonic Mucosa Colon
7 chr9:720600-739000 Weak transcription Small Intestine intestine
8 chr9:720800-744000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr9:726600-742800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr9:727400-737400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr9:727600-742000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
12 chr9:728400-737400 Strong transcription Liver Liver
13 chr9:728800-738600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr9:728800-745000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr9:728800-745000 Weak transcription Stomach Mucosa stomach
16 chr9:729200-737800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr9:729200-737800 Strong transcription NHEK skin
18 chr9:729400-737400 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr9:729400-737800 Weak transcription ES-I3 Cell Line embryonic stem cell
20 chr9:729400-743000 Strong transcription Cortex derived primary cultured neurospheres brain
21 chr9:729400-744800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr9:729400-749200 Weak transcription Primary monocytes fromperipheralblood blood
23 chr9:729600-740800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
24 chr9:730000-735000 Weak transcription HUES48 Cell Line embryonic stem cell
25 chr9:730000-745000 Weak transcription iPS-15b Cell Line embryonic stem cell
26 chr9:730200-749000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
27 chr9:731200-736800 Strong transcription Esophagus oesophagus
28 chr9:731200-737600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr9:731200-737600 Strong transcription Rectal Mucosa Donor 31 rectum
30 chr9:731200-747600 Strong transcription Duodenum Mucosa Duodenum
31 chr9:731400-735600 Genic enhancers HepG2 liver
32 chr9:731600-738800 Weak transcription Primary T helper cells fromperipheralblood blood
33 chr9:731800-735600 Weak transcription Primary B cells from cord blood blood
34 chr9:731800-735600 Weak transcription Aorta Aorta
35 chr9:732000-738000 Weak transcription Primary T helper naive cells fromperipheralblood blood
36 chr9:732000-740200 Weak transcription Right Ventricle heart
37 chr9:732800-738400 Weak transcription Primary T cells from cord blood blood
38 chr9:733000-748000 Weak transcription Primary T helper cells PMA-I stimulated --
39 chr9:733400-736000 Genic enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr9:733400-740000 Weak transcription Primary T regulatory cells fromperipheralblood blood
41 chr9:733400-740000 Genic enhancers NHDF-Ad bronchial
42 chr9:733400-740800 Weak transcription Primary neutrophils fromperipheralblood blood
43 chr9:733400-751000 Strong transcription Fetal Intestine Small intestine
44 chr9:733600-735000 Enhancers Ovary ovary
45 chr9:733600-735200 Genic enhancers Left Ventricle heart
46 chr9:733600-736000 Enhancers Brain Inferior Temporal Lobe brain
47 chr9:733600-736600 Enhancers Right Atrium heart
48 chr9:733600-738200 Strong transcription Sigmoid Colon Sigmoid Colon
49 chr9:733600-740400 Weak transcription Fetal Kidney kidney
50 chr9:733600-742400 Strong transcription Pancreas Pancrea

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