Variant report

Variant rs2852513
Chromosome Location chr6:101846616-101846617
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:101842200-101849600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr6:101842400-101849600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr6:101842800-101846800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
4 chr6:101843200-101846800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr6:101846000-101846800 Active TSS Brain Angular Gyrus brain
6 chr6:101846000-101849600 Active TSS Brain Inferior Temporal Lobe brain
7 chr6:101846200-101847200 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
8 chr6:101846400-101846800 Bivalent Enhancer Fetal Kidney kidney
9 chr6:101846400-101847000 Bivalent/Poised TSS Brain Germinal Matrix brain
10 chr6:101846400-101847800 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
11 chr6:101846400-101847800 Bivalent/Poised TSS Brain Dorsolateral Prefrontal Cortex brain
12 chr6:101846400-101847800 Active TSS Right Atrium heart
13 chr6:101846400-101848000 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
14 chr6:101846400-101848000 Active TSS Pancreatic Islets Pancreatic Islet
15 chr6:101846400-101848200 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
16 chr6:101846400-101849200 Bivalent/Poised TSS Brain Anterior Caudate brain
17 chr6:101846400-101851600 Bivalent/Poised TSS Brain Cingulate Gyrus brain
18 chr6:101846600-101846800 Bivalent/Poised TSS H1 Cell Line embryonic stem cell
19 chr6:101846600-101846800 Flanking Bivalent TSS/Enh hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr6:101846600-101846800 Flanking Bivalent TSS/Enh HUES6 Cell Line embryonic stem cell
21 chr6:101846600-101846800 Bivalent Enhancer Fetal Stomach stomach
22 chr6:101846600-101846800 Bivalent/Poised TSS NH-A brain
23 chr6:101846600-101847000 Flanking Bivalent TSS/Enh hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr6:101846600-101847000 Bivalent Enhancer Fetal Heart heart
25 chr6:101846600-101847000 Bivalent Enhancer Left Ventricle heart
26 chr6:101846600-101847000 Enhancers Right Ventricle heart
27 chr6:101846600-101847200 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
28 chr6:101846600-101847200 Flanking Bivalent TSS/Enh iPS-15b Cell Line embryonic stem cell
29 chr6:101846600-101847200 ZNF genes & repeats Pancreas Pancrea
30 chr6:101846600-101847400 Bivalent/Poised TSS Fetal Intestine Small intestine
31 chr6:101846600-101847400 Bivalent Enhancer Fetal Muscle Trunk muscle
32 chr6:101846600-101847600 Active TSS H9 Cell Line embryonic stem cell
33 chr6:101846600-101847600 Bivalent/Poised TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr6:101846600-101847600 Flanking Bivalent TSS/Enh Fetal Brain Male brain
35 chr6:101846600-101847800 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
36 chr6:101846600-101847800 Bivalent/Poised TSS Fetal Intestine Large intestine
37 chr6:101846600-101848000 Bivalent/Poised TSS Fetal Adrenal Gland Adrenal Gland
38 chr6:101846600-101848200 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
39 chr6:101846600-101848200 Bivalent/Poised TSS Fetal Brain Female brain
40 chr6:101846600-101850200 Bivalent/Poised TSS Brain Hippocampus Middle brain

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