The 2.0 version of rSNPBase

Variant report

Variant rs28577594
Chromosome Location chr12:123895906-123895907
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:123882000-123911600 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr12:123887000-123897600 Strong transcription Primary T helper cells fromperipheralblood blood
3 chr12:123888000-123896200 Strong transcription Lung lung
4 chr12:123889600-123902600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr12:123889600-123917000 Weak transcription K562 blood
6 chr12:123889800-123902800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
7 chr12:123890200-123896400 Weak transcription Primary B cells from cord blood blood
8 chr12:123890800-123917200 Weak transcription Fetal Kidney kidney
9 chr12:123891200-123920400 Weak transcription Psoas Muscle Psoas
10 chr12:123891400-123908600 Strong transcription Primary neutrophils fromperipheralblood blood
11 chr12:123891600-123919800 Weak transcription Colon Smooth Muscle Colon
12 chr12:123891600-123920000 Weak transcription Small Intestine intestine
13 chr12:123891800-123900000 Weak transcription Primary hematopoietic stem cells blood
14 chr12:123892000-123899600 Weak transcription Primary T cells from cord blood blood
15 chr12:123892000-123899600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
16 chr12:123892000-123903800 Weak transcription Primary T helper naive cells fromperipheralblood blood
17 chr12:123892000-123911400 Weak transcription Primary T killer naive cells fromperipheralblood blood
18 chr12:123892200-123897000 Weak transcription Ovary ovary
19 chr12:123892200-123901200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr12:123892200-123905200 Weak transcription Primary T helper naive cells from peripheral blood blood
21 chr12:123892200-123905200 Weak transcription Brain Angular Gyrus brain
22 chr12:123892200-123905200 Weak transcription HMEC breast
23 chr12:123892200-123910000 Weak transcription Placenta Amnion Placenta Amnion
24 chr12:123892200-123916800 Weak transcription NHEK skin
25 chr12:123892200-123920200 Weak transcription NH-A brain
26 chr12:123892400-123899600 Weak transcription HepG2 liver
27 chr12:123892600-123907000 Weak transcription Rectal Mucosa Donor 29 rectum
28 chr12:123892800-123896800 Weak transcription Breast Myoepithelial Primary Cells Breast
29 chr12:123892800-123900000 Weak transcription Aorta Aorta
30 chr12:123892800-123920000 Weak transcription iPS-15b Cell Line embryonic stem cell
31 chr12:123893400-123905200 Weak transcription Rectal Smooth Muscle rectum
32 chr12:123893400-123918200 Weak transcription Hela-S3 cervix
33 chr12:123893600-123896400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr12:123893600-123898000 Weak transcription HUES6 Cell Line embryonic stem cell
35 chr12:123893600-123905200 Weak transcription Brain Inferior Temporal Lobe brain
36 chr12:123893600-123905200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
37 chr12:123893800-123897000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
38 chr12:123893800-123905200 Weak transcription Gastric stomach
39 chr12:123893800-123908200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr12:123893800-123909600 Weak transcription Brain Germinal Matrix brain
41 chr12:123894000-123907800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr12:123894000-123920600 Weak transcription HSMMtube muscle
43 chr12:123894200-123896800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr12:123894200-123896800 Weak transcription Primary T cells fromperipheralblood blood
45 chr12:123894200-123897000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
46 chr12:123894200-123899600 Weak transcription Primary B cells from peripheral blood blood
47 chr12:123894200-123899600 Weak transcription Primary T helper cells PMA-I stimulated --
48 chr12:123894200-123899800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr12:123894200-123905200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr12:123894200-123905400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015