Variant report

Variant	rs28599560
Chromosome Location	chr5:91791853-91791854
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs12515713	0.82[ASN][1000 genomes]
rs13168674	0.84[ASN][1000 genomes]
rs13361967	0.84[ASN][1000 genomes]
rs34135545	0.81[ASN][1000 genomes]
rs34957590	0.81[ASN][1000 genomes]
rs35148225	0.82[ASN][1000 genomes]
rs36081011	0.81[ASN][1000 genomes]
rs36097806	0.81[ASN][1000 genomes]
rs4260649	0.81[ASN][1000 genomes]
rs4351128	0.81[ASN][1000 genomes]
rs4869411	0.81[ASN][1000 genomes]
rs55908760	0.84[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2763469	chr5:91759081-91812497	Enhancers ZNF genes & repeats Weak transcription Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:91791200-91792000	Enhancers	GM12878-XiMat	blood

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links