The 2.0 version of rSNPBase

Variant report

Variant rs28603312
Chromosome Location chr8:48612817-48612818
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:48582000-48613000 Weak transcription Aorta Aorta
2 chr8:48583000-48613000 Weak transcription Placenta Amnion Placenta Amnion
3 chr8:48585200-48613000 Weak transcription Fetal Stomach stomach
4 chr8:48590600-48625200 Weak transcription HepG2 liver
5 chr8:48593200-48624000 Weak transcription Thymus Thymus
6 chr8:48593600-48613000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr8:48597000-48625400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr8:48597200-48614200 Weak transcription Hela-S3 cervix
9 chr8:48597200-48647200 Weak transcription NHEK skin
10 chr8:48597200-48647400 Weak transcription HMEC breast
11 chr8:48597400-48614600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr8:48599200-48626600 Weak transcription Fetal Kidney kidney
13 chr8:48600600-48615600 Weak transcription Primary T helper naive cells from peripheral blood blood
14 chr8:48600800-48614400 Weak transcription Primary B cells from peripheral blood blood
15 chr8:48601800-48613000 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr8:48602400-48616400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr8:48602800-48647800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr8:48603000-48614200 Weak transcription Primary T cells from cord blood blood
19 chr8:48603400-48614800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
20 chr8:48604000-48613000 Weak transcription Fetal Brain Female brain
21 chr8:48604200-48615000 Weak transcription Colonic Mucosa Colon
22 chr8:48604400-48615000 Weak transcription Pancreas Pancrea
23 chr8:48604400-48619000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
24 chr8:48604400-48648400 Weak transcription Small Intestine intestine
25 chr8:48604600-48614800 Weak transcription Rectal Smooth Muscle rectum
26 chr8:48604600-48615200 Weak transcription Duodenum Smooth Muscle Duodenum
27 chr8:48605000-48614400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr8:48605000-48614800 Weak transcription Liver Liver
29 chr8:48605000-48625400 Weak transcription Primary neutrophils fromperipheralblood blood
30 chr8:48606400-48624400 Weak transcription Psoas Muscle Psoas
31 chr8:48606600-48613000 Weak transcription Primary hematopoietic stem cells short term culture blood
32 chr8:48606600-48615200 Weak transcription Right Ventricle heart
33 chr8:48606600-48624000 Weak transcription Right Atrium heart
34 chr8:48606800-48646400 Weak transcription Fetal Heart heart
35 chr8:48609200-48632400 Weak transcription Pancreatic Islets Pancreatic Islet
36 chr8:48609400-48615000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
37 chr8:48609600-48613000 Weak transcription Primary B cells from cord blood blood
38 chr8:48609600-48614800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
39 chr8:48610400-48613200 Weak transcription Placenta Placenta
40 chr8:48610400-48625200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
41 chr8:48610600-48613000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
42 chr8:48610600-48613000 Weak transcription Fetal Lung lung
43 chr8:48610600-48614800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
44 chr8:48610600-48614800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
45 chr8:48610600-48614800 Weak transcription Left Ventricle heart
46 chr8:48610600-48616800 Weak transcription Esophagus oesophagus
47 chr8:48610600-48624400 Weak transcription HSMM muscle
48 chr8:48610600-48625000 Weak transcription Fetal Thymus thymus
49 chr8:48610600-48625400 Weak transcription Brain Germinal Matrix brain
50 chr8:48610600-48625400 Weak transcription Brain Hippocampus Middle brain

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Last update: Aug 31, 2015