Variant report

Variant rs28604927
Chromosome Location chr9:618084-618085
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:590000-625000 Weak transcription Aorta Aorta
2 chr9:590200-621600 Weak transcription Psoas Muscle Psoas
3 chr9:606000-628200 Weak transcription H9 Cell Line embryonic stem cell
4 chr9:610400-618200 Enhancers Fetal Heart heart
5 chr9:613200-618400 Enhancers Breast Myoepithelial Primary Cells Breast
6 chr9:613800-619400 Enhancers NHEK skin
7 chr9:614000-618200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr9:614000-618400 Enhancers Left Ventricle heart
9 chr9:614400-630800 Weak transcription A549 lung
10 chr9:614600-621600 Weak transcription Fetal Kidney kidney
11 chr9:614600-625800 Weak transcription ES-I3 Cell Line embryonic stem cell
12 chr9:614800-618400 Weak transcription NHLF lung
13 chr9:614800-618800 Weak transcription NH-A brain
14 chr9:614800-618800 Weak transcription NHDF-Ad bronchial
15 chr9:614800-619200 Weak transcription Brain Inferior Temporal Lobe brain
16 chr9:614800-619600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr9:614800-621000 Weak transcription Duodenum Mucosa Duodenum
18 chr9:614800-621400 Weak transcription Adipose Nuclei Adipose
19 chr9:614800-621400 Weak transcription Skeletal Muscle Male skeletal muscle
20 chr9:614800-621600 Weak transcription Fetal Muscle Leg muscle
21 chr9:614800-621600 Weak transcription Gastric stomach
22 chr9:614800-627000 Weak transcription Fetal Intestine Small intestine
23 chr9:614800-631400 Weak transcription Esophagus oesophagus
24 chr9:615200-618400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr9:615200-619200 Weak transcription Brain Cingulate Gyrus brain
26 chr9:615200-625800 Weak transcription Placenta Placenta
27 chr9:616000-621000 Weak transcription HepG2 liver
28 chr9:616200-621200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
29 chr9:616600-618200 Enhancers HSMM muscle
30 chr9:616600-619600 Enhancers Colon Smooth Muscle Colon
31 chr9:616600-620000 Enhancers Muscle Satellite Cultured Cells --
32 chr9:616800-618400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr9:616800-619400 Enhancers Rectal Smooth Muscle rectum
34 chr9:616800-619800 Enhancers Placenta Amnion Placenta Amnion
35 chr9:616800-655800 Weak transcription Pancreas Pancrea
36 chr9:617000-621200 Weak transcription Skeletal Muscle Female skeletal muscle
37 chr9:617000-626000 Weak transcription Stomach Mucosa stomach
38 chr9:617000-628000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr9:617000-631000 Weak transcription HMEC breast
40 chr9:617600-619800 Enhancers Osteobl bone
41 chr9:617800-618200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
42 chr9:617800-618800 Weak transcription Brain Substantia Nigra brain
43 chr9:617800-619200 Weak transcription HUES48 Cell Line embryonic stem cell
44 chr9:617800-619600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr9:617800-621600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
46 chr9:617800-622200 Weak transcription Rectal Mucosa Donor 31 rectum
47 chr9:617800-626200 Weak transcription Right Atrium heart
48 chr9:618000-618200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr9:618000-618200 Enhancers Brain Hippocampus Middle brain
50 chr9:618000-619000 Weak transcription Brain Anterior Caudate brain

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