The 2.0 version of rSNPBase

Variant report

Variant rs28609408
Chromosome Location chr4:125609834-125609835
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:125592400-125611400 Weak transcription HepG2 liver
2 chr4:125593000-125618200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr4:125593000-125621800 Weak transcription Fetal Stomach stomach
4 chr4:125593000-125631200 Weak transcription Esophagus oesophagus
5 chr4:125593400-125621800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
6 chr4:125593400-125629800 Weak transcription Aorta Aorta
7 chr4:125593400-125629800 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr4:125593400-125631200 Weak transcription Thymus Thymus
9 chr4:125593600-125610400 Weak transcription Duodenum Smooth Muscle Duodenum
10 chr4:125593600-125617400 Weak transcription Fetal Intestine Large intestine
11 chr4:125593600-125629600 Weak transcription HSMMtube muscle
12 chr4:125593600-125631000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr4:125593800-125610200 Weak transcription Primary T cells from cord blood blood
14 chr4:125594200-125625400 Weak transcription Hela-S3 cervix
15 chr4:125594200-125631200 Weak transcription Fetal Thymus thymus
16 chr4:125594600-125616600 Weak transcription A549 lung
17 chr4:125597400-125631200 Weak transcription Rectal Mucosa Donor 31 rectum
18 chr4:125599200-125627800 Weak transcription Placenta Placenta
19 chr4:125600000-125618000 Weak transcription NHDF-Ad bronchial
20 chr4:125600000-125618200 Weak transcription Dnd41 blood
21 chr4:125600000-125618600 Weak transcription Fetal Brain Female brain
22 chr4:125600200-125613600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr4:125600200-125616600 Weak transcription Adipose Nuclei Adipose
24 chr4:125601000-125612800 Weak transcription Monocytes-CD14+_RO01746 blood
25 chr4:125601200-125612800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr4:125601200-125617000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr4:125601600-125621200 Weak transcription Fetal Heart heart
28 chr4:125606000-125624400 Weak transcription Fetal Brain Male brain
29 chr4:125606000-125631000 Weak transcription Placenta Amnion Placenta Amnion
30 chr4:125606200-125629600 Weak transcription K562 blood
31 chr4:125606400-125615600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
32 chr4:125606400-125615800 Weak transcription Rectal Smooth Muscle rectum
33 chr4:125606400-125621800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr4:125607800-125610000 Weak transcription Cortex derived primary cultured neurospheres brain
35 chr4:125607800-125615800 Weak transcription Ovary ovary
36 chr4:125607800-125621200 Weak transcription NH-A brain
37 chr4:125607800-125631200 Weak transcription Left Ventricle heart
38 chr4:125608000-125610400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
39 chr4:125608000-125610600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr4:125608000-125610800 Weak transcription HUES6 Cell Line embryonic stem cell
41 chr4:125608000-125612800 Weak transcription NHEK skin
42 chr4:125608000-125615600 Weak transcription H9 Cell Line embryonic stem cell
43 chr4:125608000-125616400 Weak transcription H1 Cell Line embryonic stem cell
44 chr4:125608000-125618600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr4:125608000-125621200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
46 chr4:125608200-125611400 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr4:125608200-125618200 Weak transcription HMEC breast
48 chr4:125608200-125621800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr4:125608200-125629800 Weak transcription ES-I3 Cell Line embryonic stem cell
50 chr4:125608400-125610200 Weak transcription iPS-20b Cell Line embryonic stem cell

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015