The 2.0 version of rSNPBase

Variant report

Variant rs28647363
Chromosome Location chr4:143628675-143628676
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:23 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:143616000-143628800 Enhancers Primary T helper cells fromperipheralblood blood
2 chr4:143616800-143629600 Enhancers Primary T killer naive cells fromperipheralblood blood
3 chr4:143620800-143642000 Weak transcription Fetal Heart heart
4 chr4:143622200-143629200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
5 chr4:143624400-143629400 Enhancers Primary T regulatory cells fromperipheralblood blood
6 chr4:143625200-143629600 Weak transcription Aorta Aorta
7 chr4:143625200-143641600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr4:143625400-143629800 Enhancers Primary T helper 17 cells PMA-I stimulated --
9 chr4:143627200-143630600 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
10 chr4:143627400-143629600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr4:143628200-143628800 Weak transcription Primary hematopoietic stem cells blood
12 chr4:143628200-143629600 ZNF genes & repeats Primary T cells fromperipheralblood blood
13 chr4:143628200-143630600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
14 chr4:143628200-143631600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr4:143628200-143631600 ZNF genes & repeats Dnd41 blood
16 chr4:143628400-143628800 Flanking Active TSS Primary T helper cells PMA-I stimulated --
17 chr4:143628400-143628800 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
18 chr4:143628400-143628800 Enhancers Fetal Thymus thymus
19 chr4:143628400-143628800 Enhancers Thymus Thymus
20 chr4:143628600-143628800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
21 chr4:143628600-143628800 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
22 chr4:143628600-143628800 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
23 chr4:143628600-143630400 ZNF genes & repeats Primary T helper naive cells fromperipheralblood blood

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Last update: Aug 31, 2015