The 2.0 version of rSNPBase

Variant report

Variant rs2864819
Chromosome Location chr2:55444739-55444740
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:55397200-55450000 Weak transcription NH-A brain
2 chr2:55402800-55450000 Weak transcription NHDF-Ad bronchial
3 chr2:55415400-55450000 Weak transcription GM12878-XiMat blood
4 chr2:55416800-55450000 Weak transcription Rectal Smooth Muscle rectum
5 chr2:55417400-55450200 Weak transcription Placenta Placenta
6 chr2:55417800-55450000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr2:55423800-55448000 Weak transcription HSMM muscle
8 chr2:55424200-55450000 Weak transcription Muscle Satellite Cultured Cells --
9 chr2:55424600-55449800 Weak transcription Thymus Thymus
10 chr2:55424600-55450000 Weak transcription Brain Inferior Temporal Lobe brain
11 chr2:55424600-55450200 Weak transcription Brain Germinal Matrix brain
12 chr2:55424600-55451200 Weak transcription HepG2 liver
13 chr2:55424800-55450200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr2:55425600-55449800 Weak transcription Fetal Muscle Trunk muscle
15 chr2:55427400-55450200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
16 chr2:55427400-55450200 Weak transcription Aorta Aorta
17 chr2:55427400-55450600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr2:55427400-55450600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr2:55429200-55449800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr2:55430000-55450400 Weak transcription Left Ventricle heart
21 chr2:55432000-55449800 Weak transcription Primary hematopoietic stem cells blood
22 chr2:55432000-55451200 Weak transcription Dnd41 blood
23 chr2:55432200-55450000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr2:55432600-55448800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr2:55432800-55450000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
26 chr2:55432800-55450000 Weak transcription Fetal Stomach stomach
27 chr2:55433000-55448800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr2:55433000-55448800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
29 chr2:55433000-55449800 Weak transcription Pancreas Pancrea
30 chr2:55433000-55450200 Weak transcription Ovary ovary
31 chr2:55433400-55450000 Weak transcription Breast Myoepithelial Primary Cells Breast
32 chr2:55433600-55448200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
33 chr2:55433600-55448600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr2:55441200-55450000 Weak transcription K562 blood
35 chr2:55441400-55450000 Weak transcription Fetal Adrenal Gland Adrenal Gland
36 chr2:55442800-55446800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr2:55444400-55450400 Weak transcription Gastric stomach
38 chr2:55444600-55445200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr2:55444600-55449800 Weak transcription Fetal Intestine Small intestine

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Last update: Aug 31, 2015