The 2.0 version of rSNPBase

Variant report

Variant rs2864832
Chromosome Location chr2:55602323-55602324
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:55510200-55616800 Weak transcription Fetal Intestine Small intestine
2 chr2:55537800-55609400 Weak transcription Lung lung
3 chr2:55542400-55644800 Weak transcription Primary T cells from cord blood blood
4 chr2:55555200-55635800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
5 chr2:55564200-55605200 Weak transcription Fetal Kidney kidney
6 chr2:55572000-55610200 Weak transcription Liver Liver
7 chr2:55576000-55612200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
8 chr2:55579200-55640800 Weak transcription Fetal Brain Male brain
9 chr2:55579400-55614400 Weak transcription Fetal Brain Female brain
10 chr2:55579400-55622400 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr2:55579400-55644400 Weak transcription Primary B cells from cord blood blood
12 chr2:55579600-55632200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr2:55582000-55632400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr2:55582200-55603600 Weak transcription Ovary ovary
15 chr2:55582800-55615000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr2:55583200-55605000 Weak transcription HepG2 liver
17 chr2:55583400-55602400 Weak transcription Primary neutrophils fromperipheralblood blood
18 chr2:55583600-55606800 Weak transcription H1 Cell Line embryonic stem cell
19 chr2:55583600-55607200 Weak transcription Skeletal Muscle Female skeletal muscle
20 chr2:55584200-55612000 Weak transcription Fetal Muscle Trunk muscle
21 chr2:55589400-55639400 Weak transcription Aorta Aorta
22 chr2:55589600-55628800 Weak transcription Fetal Thymus thymus
23 chr2:55589600-55632200 Weak transcription HUES6 Cell Line embryonic stem cell
24 chr2:55590400-55622400 Weak transcription GM12878-XiMat blood
25 chr2:55591000-55646000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
26 chr2:55592000-55635400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr2:55592200-55617600 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr2:55592200-55631800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr2:55592800-55609400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr2:55592800-55609600 Weak transcription Duodenum Smooth Muscle Duodenum
31 chr2:55592800-55615600 Weak transcription NHEK skin
32 chr2:55592800-55617800 Weak transcription A549 lung
33 chr2:55592800-55626600 Weak transcription Muscle Satellite Cultured Cells --
34 chr2:55592800-55635600 Weak transcription HSMMtube muscle
35 chr2:55593000-55622400 Weak transcription Brain Angular Gyrus brain
36 chr2:55593000-55622400 Weak transcription Brain Anterior Caudate brain
37 chr2:55593200-55611000 Weak transcription Cortex derived primary cultured neurospheres brain
38 chr2:55593200-55632600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr2:55593400-55616400 Weak transcription HUVEC blood vessel
40 chr2:55593800-55631800 Weak transcription Brain Germinal Matrix brain
41 chr2:55594400-55603600 Strong transcription Primary monocytes fromperipheralblood blood
42 chr2:55595400-55605000 Weak transcription Primary hematopoietic stem cells blood
43 chr2:55596600-55603600 Strong transcription Monocytes-CD14+_RO01746 blood
44 chr2:55596600-55608400 Weak transcription Brain Cingulate Gyrus brain
45 chr2:55598000-55602400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr2:55598000-55611200 Weak transcription Fetal Stomach stomach
47 chr2:55598200-55616200 Weak transcription Fetal Adrenal Gland Adrenal Gland
48 chr2:55598800-55602400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr2:55599200-55603600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr2:55599200-55626800 Weak transcription Osteobl bone

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Last update: Aug 31, 2015