The 2.0 version of rSNPBase

Variant report

Variant rs28649839
Chromosome Location chr4:144146200-144146201
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:144118400-144150000 Weak transcription Aorta Aorta
2 chr4:144120600-144147000 Weak transcription Esophagus oesophagus
3 chr4:144120800-144149400 Weak transcription Pancreas Pancrea
4 chr4:144125800-144155600 Weak transcription Fetal Stomach stomach
5 chr4:144126600-144146200 Weak transcription A549 lung
6 chr4:144128200-144148600 Weak transcription K562 blood
7 chr4:144135200-144146600 Weak transcription H9 Cell Line embryonic stem cell
8 chr4:144135200-144151400 Weak transcription Lung lung
9 chr4:144135800-144146200 Weak transcription H1 Cell Line embryonic stem cell
10 chr4:144135800-144148000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
11 chr4:144135800-144151400 Weak transcription Left Ventricle heart
12 chr4:144135800-144153400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr4:144136000-144148200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
14 chr4:144136000-144148200 Weak transcription Brain Germinal Matrix brain
15 chr4:144136000-144148400 Weak transcription Fetal Adrenal Gland Adrenal Gland
16 chr4:144136000-144149200 Weak transcription Psoas Muscle Psoas
17 chr4:144136000-144149600 Weak transcription Cortex derived primary cultured neurospheres brain
18 chr4:144136000-144149600 Weak transcription Thymus Thymus
19 chr4:144136200-144148000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr4:144136200-144148200 Weak transcription Brain Anterior Caudate brain
21 chr4:144136400-144146200 Weak transcription Primary T killer naive cells fromperipheralblood blood
22 chr4:144136400-144147000 Weak transcription Duodenum Mucosa Duodenum
23 chr4:144136400-144148400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
24 chr4:144136400-144151600 Weak transcription HUES6 Cell Line embryonic stem cell
25 chr4:144136600-144146400 Weak transcription Primary B cells from cord blood blood
26 chr4:144136600-144148000 Weak transcription Muscle Satellite Cultured Cells --
27 chr4:144136600-144148400 Weak transcription Fetal Brain Male brain
28 chr4:144137000-144150800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr4:144137200-144148400 Weak transcription Fetal Brain Female brain
30 chr4:144139800-144146800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
31 chr4:144140800-144146800 Strong transcription Monocytes-CD14+_RO01746 blood
32 chr4:144142000-144148000 Weak transcription Breast Myoepithelial Primary Cells Breast
33 chr4:144142000-144148200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
34 chr4:144142800-144146400 Weak transcription iPS-20b Cell Line embryonic stem cell
35 chr4:144142800-144151200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr4:144143200-144146400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr4:144143200-144148000 Weak transcription Primary hematopoietic stem cells short term culture blood
38 chr4:144143200-144148600 Weak transcription HMEC breast
39 chr4:144143200-144151200 Weak transcription GM12878-XiMat blood
40 chr4:144143400-144148200 Weak transcription Primary T regulatory cells fromperipheralblood blood
41 chr4:144143600-144147200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
42 chr4:144143600-144147400 Weak transcription Primary T helper cells fromperipheralblood blood
43 chr4:144143800-144148200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr4:144144000-144146200 Enhancers Rectal Smooth Muscle rectum
45 chr4:144144200-144146600 Enhancers Colon Smooth Muscle Colon
46 chr4:144144400-144146400 Weak transcription HSMM muscle
47 chr4:144144400-144148000 Weak transcription Primary hematopoietic stem cells blood
48 chr4:144144400-144154600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr4:144144600-144146200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr4:144144600-144146200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015