Variant report

Variant rs28679663
Chromosome Location chr3:141926636-141926637
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:141868800-141943000 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr3:141869000-141926800 Weak transcription Cortex derived primary cultured neurospheres brain
3 chr3:141883600-141927200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr3:141888000-141943200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
5 chr3:141888400-141927200 Weak transcription GM12878-XiMat blood
6 chr3:141888400-141930000 Weak transcription Placenta Amnion Placenta Amnion
7 chr3:141888600-141928600 Weak transcription Brain Hippocampus Middle brain
8 chr3:141889000-141943600 Weak transcription Psoas Muscle Psoas
9 chr3:141889400-141928200 Weak transcription HSMMtube muscle
10 chr3:141889400-141928400 Weak transcription HUVEC blood vessel
11 chr3:141889400-141928600 Weak transcription Brain Substantia Nigra brain
12 chr3:141890000-141929000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr3:141896600-141930000 Weak transcription Skeletal Muscle Male skeletal muscle
14 chr3:141896600-141943200 Weak transcription HMEC breast
15 chr3:141902000-141929200 Weak transcription Primary T helper naive cells from peripheral blood blood
16 chr3:141904200-141930000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr3:141905200-141928800 Weak transcription NH-A brain
18 chr3:141919000-141928000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr3:141919200-141928000 Strong transcription Muscle Satellite Cultured Cells --
20 chr3:141919200-141942800 Weak transcription Primary T killer naive cells fromperipheralblood blood
21 chr3:141919400-141927000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr3:141919800-141926800 Weak transcription Pancreatic Islets Pancreatic Islet
23 chr3:141919800-141927200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr3:141920200-141929000 Weak transcription iPS-15b Cell Line embryonic stem cell
25 chr3:141920200-141932800 Strong transcription Fetal Intestine Large intestine
26 chr3:141920400-141928600 Weak transcription Fetal Heart heart
27 chr3:141920800-141931800 Strong transcription Primary T cells fromperipheralblood blood
28 chr3:141920800-141932400 Strong transcription Primary B cells from cord blood blood
29 chr3:141921400-141928200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
30 chr3:141921400-141928600 Weak transcription Aorta Aorta
31 chr3:141921400-141929200 Weak transcription Spleen Spleen
32 chr3:141921400-141938000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
33 chr3:141921600-141928600 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr3:141921600-141928800 Weak transcription Brain Cingulate Gyrus brain
35 chr3:141921600-141930000 Weak transcription Colonic Mucosa Colon
36 chr3:141921600-141935200 Weak transcription Small Intestine intestine
37 chr3:141922400-141929600 Weak transcription HepG2 liver
38 chr3:141922600-141928400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr3:141923000-141929000 Weak transcription Pancreas Pancrea
40 chr3:141923000-141929600 Weak transcription Placenta Placenta
41 chr3:141923200-141927600 Weak transcription Fetal Stomach stomach
42 chr3:141923200-141928000 Weak transcription Rectal Smooth Muscle rectum
43 chr3:141923200-141928600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr3:141923200-141928600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
45 chr3:141923200-141928600 Weak transcription Brain Inferior Temporal Lobe brain
46 chr3:141923200-141929000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr3:141923200-141929000 Weak transcription Left Ventricle heart
48 chr3:141923200-141929000 Weak transcription Lung lung
49 chr3:141923200-141930400 Weak transcription Esophagus oesophagus
50 chr3:141923200-141933600 Weak transcription Gastric stomach

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