The 2.0 version of rSNPBase

Variant report

Variant rs2869084
Chromosome Location chr19:53170558-53170559
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:53152200-53172000 Weak transcription Psoas Muscle Psoas
2 chr19:53153600-53184200 Weak transcription Colonic Mucosa Colon
3 chr19:53155000-53191400 Weak transcription Colon Smooth Muscle Colon
4 chr19:53157000-53176600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
5 chr19:53157200-53191600 Weak transcription Rectal Smooth Muscle rectum
6 chr19:53158600-53177200 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr19:53162600-53173200 Weak transcription Esophagus oesophagus
8 chr19:53162600-53182600 Weak transcription Fetal Muscle Trunk muscle
9 chr19:53162800-53174600 Strong transcription Primary hematopoietic stem cells short term culture blood
10 chr19:53162800-53186600 Weak transcription Aorta Aorta
11 chr19:53163000-53182600 Weak transcription Hela-S3 cervix
12 chr19:53163000-53192400 Weak transcription Rectal Mucosa Donor 29 rectum
13 chr19:53163200-53183000 Weak transcription Primary B cells from peripheral blood blood
14 chr19:53163800-53177200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
15 chr19:53163800-53183200 Weak transcription HUVEC blood vessel
16 chr19:53163800-53188400 Weak transcription Ovary ovary
17 chr19:53164000-53174400 Weak transcription GM12878-XiMat blood
18 chr19:53164000-53178600 Weak transcription Brain Germinal Matrix brain
19 chr19:53164000-53183000 Weak transcription Adipose Nuclei Adipose
20 chr19:53164000-53185600 Weak transcription Muscle Satellite Cultured Cells --
21 chr19:53164000-53192400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr19:53164000-53192400 Weak transcription NH-A brain
23 chr19:53164000-53193000 Weak transcription Right Ventricle heart
24 chr19:53164200-53177200 Weak transcription Primary T helper cells PMA-I stimulated --
25 chr19:53164200-53177200 Weak transcription Primary T helper cells fromperipheralblood blood
26 chr19:53164200-53192400 Weak transcription Brain Angular Gyrus brain
27 chr19:53164400-53176400 Weak transcription Fetal Lung lung
28 chr19:53164400-53192400 Weak transcription HSMM muscle
29 chr19:53164600-53189200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr19:53164600-53192200 Weak transcription Primary T killer naive cells fromperipheralblood blood
31 chr19:53164800-53172800 Weak transcription Fetal Intestine Small intestine
32 chr19:53164800-53186400 Weak transcription Osteobl bone
33 chr19:53165000-53177400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
34 chr19:53165000-53179000 Weak transcription Primary T helper naive cells fromperipheralblood blood
35 chr19:53165000-53191600 Weak transcription Cortex derived primary cultured neurospheres brain
36 chr19:53165000-53191800 Weak transcription Duodenum Smooth Muscle Duodenum
37 chr19:53165000-53192400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
38 chr19:53165200-53172800 Weak transcription Breast Myoepithelial Primary Cells Breast
39 chr19:53165200-53177200 Weak transcription Primary T helper naive cells from peripheral blood blood
40 chr19:53165200-53186400 Weak transcription Fetal Thymus thymus
41 chr19:53165200-53186400 Weak transcription NHLF lung
42 chr19:53165400-53171800 Weak transcription Primary B cells from cord blood blood
43 chr19:53165400-53183000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
44 chr19:53165600-53179000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
45 chr19:53165600-53191800 Weak transcription NHDF-Ad bronchial
46 chr19:53165800-53179000 Weak transcription Primary hematopoietic stem cells blood
47 chr19:53165800-53186400 Weak transcription Pancreas Pancrea
48 chr19:53165800-53191600 Weak transcription Fetal Brain Female brain
49 chr19:53166200-53182400 Weak transcription Stomach Smooth Muscle stomach
50 chr19:53166400-53172000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015