Variant report

No.	Distal block	Cell Line	Cell type
1	chr14:70132759..70134809-chr14:70205522..70208289,2	MCF-7	breast:
2	chr14:70206029..70208107-chr14:70210614..70212846,2	MCF-7	breast:
3	chr14:70201940..70209552-chr14:70230630..70235494,20	MCF-7	breast:
4	chr14:70202452..70213184-chr14:70231962..70238183,25	MCF-7	breast:
5	chr14:70206409..70208457-chr14:70238342..70240057,3	MCF-7	breast:
6	chr14:70200097..70202491-chr14:70206631..70210383,3	K562	blood:

Variant related genes	Relation type
ENSG00000100650	Chromatin interaction

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10047848	1.00[EUR][1000 genomes]
rs10130124	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10131362	1.00[EUR][1000 genomes]
rs10137013	1.00[EUR][1000 genomes]
rs10137162	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10138453	1.00[EUR][1000 genomes]
rs10144038	1.00[EUR][1000 genomes]
rs10146486	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10148264	1.00[EUR][1000 genomes]
rs10148957	1.00[EUR][1000 genomes]
rs10149936	1.00[EUR][1000 genomes]
rs10150246	1.00[EUR][1000 genomes]
rs10151989	1.00[EUR][1000 genomes]
rs10220277	1.00[EUR][1000 genomes]
rs11847514	1.00[EUR][1000 genomes]
rs1275744	1.00[EUR][1000 genomes]
rs1275845	1.00[EUR][1000 genomes]
rs1952203	1.00[EUR][1000 genomes]
rs28435330	1.00[EUR][1000 genomes]
rs28445972	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28524787	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28633309	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28671429	1.00[EUR][1000 genomes]
rs28758769	1.00[EUR][1000 genomes]
rs28879830	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7154537	1.00[EUR][1000 genomes]
rs8008142	1.00[AMR][1000 genomes]
rs9805962	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv456336	chr14:70081956-70574149	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	75 gene(s)	inside rSNPs	diseases
2	nsv565007	chr14:70081956-70574149	Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	75 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:70198400-70207400	Weak transcription	Liver	Liver
2	chr14:70206000-70208600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr14:70206400-70208200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr14:70206400-70208200	Enhancers	HMEC	breast
5	chr14:70206600-70207400	Enhancers	iPS-18 Cell Line	embryonic stem cell
6	chr14:70206800-70207600	Weak transcription	Stomach Mucosa	stomach
7	chr14:70207000-70207800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
8	chr14:70207200-70208400	Enhancers	HepG2	liver
9	chr14:70207200-70208600	Enhancers	NHEK	skin

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