The 2.0 version of rSNPBase

Variant report

Variant rs28759130
Chromosome Location chr12:123849774-123849775
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:123847200-123850600 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
2 chr12:123847400-123850400 Active TSS Breast Myoepithelial Primary Cells Breast
3 chr12:123847400-123850600 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr12:123847400-123850600 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
5 chr12:123847400-123850600 Active TSS Right Ventricle heart
6 chr12:123847400-123850800 Active TSS HUES64 Cell Line embryonic stem cell
7 chr12:123847600-123850400 Active TSS Aorta Aorta
8 chr12:123847600-123850600 Active TSS Pancreatic Islets Pancreatic Islet
9 chr12:123847600-123850600 Active TSS Psoas Muscle Psoas
10 chr12:123847600-123850600 Active TSS NHLF lung
11 chr12:123847800-123850000 Active TSS HSMM muscle
12 chr12:123847800-123850000 Active TSS HSMMtube muscle
13 chr12:123847800-123850400 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
14 chr12:123847800-123850600 Active TSS H1 Cell Line embryonic stem cell
15 chr12:123847800-123850600 Active TSS H9 Cell Line embryonic stem cell
16 chr12:123847800-123850600 Active TSS HUES48 Cell Line embryonic stem cell
17 chr12:123847800-123850600 Active TSS HUES6 Cell Line embryonic stem cell
18 chr12:123847800-123850600 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
19 chr12:123847800-123850600 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
20 chr12:123847800-123850600 Active TSS Fetal Muscle Trunk muscle
21 chr12:123847800-123850600 Active TSS Right Atrium heart
22 chr12:123847800-123850800 Active TSS GM12878-XiMat blood
23 chr12:123848000-123850400 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr12:123848000-123850400 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
25 chr12:123848000-123850400 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr12:123848000-123850400 Active TSS Ovary ovary
27 chr12:123848000-123850400 Active TSS Rectal Mucosa Donor 29 rectum
28 chr12:123848000-123850600 Active TSS ES-I3 Cell Line embryonic stem cell
29 chr12:123848000-123850600 Active TSS ES-WA7 Cell Line embryonic stem cell
30 chr12:123848000-123850600 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
31 chr12:123848000-123850600 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr12:123848000-123850600 Active TSS iPS-18 Cell Line embryonic stem cell
33 chr12:123848000-123850600 Active TSS Colon Smooth Muscle Colon
34 chr12:123848000-123850600 Active TSS Duodenum Smooth Muscle Duodenum
35 chr12:123848000-123850600 Active TSS Fetal Intestine Large intestine
36 chr12:123848000-123850600 Active TSS Fetal Intestine Small intestine
37 chr12:123848000-123850600 Active TSS A549 lung
38 chr12:123848000-123850800 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr12:123848000-123850800 Active TSS Fetal Kidney kidney
40 chr12:123848000-123850800 Active TSS Thymus Thymus
41 chr12:123848200-123850000 Active TSS Primary T helper cells PMA-I stimulated --
42 chr12:123848200-123850000 Active TSS Muscle Satellite Cultured Cells --
43 chr12:123848200-123850000 Active TSS Cortex derived primary cultured neurospheres brain
44 chr12:123848200-123850000 Active TSS Stomach Mucosa stomach
45 chr12:123848200-123850000 Active TSS HMEC breast
46 chr12:123848200-123850000 Active TSS NHEK skin
47 chr12:123848200-123850200 Active TSS ES-UCSF4 Cell Line embryonic stem cell
48 chr12:123848200-123850200 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
49 chr12:123848200-123850200 Active TSS Primary T killer naive cells fromperipheralblood blood
50 chr12:123848200-123850200 Active TSS Primary T killer memory cells from peripheral blood blood

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Last update: Aug 31, 2015