Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10047915	1.00[CEU][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs10129266	1.00[CEU][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10130235	1.00[AMR][1000 genomes]
rs10132631	1.00[CEU][hapmap]
rs10134070	1.00[CEU][hapmap];1.00[YRI][hapmap];0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10134883	1.00[CEU][hapmap];1.00[YRI][hapmap];0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10146194	1.00[CEU][hapmap];1.00[YRI][hapmap];0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11851166	1.00[CEU][hapmap]
rs28410983	1.00[EUR][1000 genomes]
rs28417884	1.00[EUR][1000 genomes]
rs28702941	1.00[EUR][1000 genomes]
rs28776512	1.00[EUR][1000 genomes]
rs28829720	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57027270	1.00[EUR][1000 genomes]
rs6574036	0.83[YRI][hapmap]
rs7150767	1.00[EUR][1000 genomes]
rs7151873	1.00[EUR][1000 genomes]
rs7151878	1.00[EUR][1000 genomes]
rs72625695	1.00[EUR][1000 genomes]
rs728495	0.82[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530794	chr14:72113818-73034008	Enhancers Bivalent/Poised TSS Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:72441400-72442800	ZNF genes & repeats	Cortex derived primary cultured neurospheres	brain
2	chr14:72441600-72442800	ZNF genes & repeats	Ganglion Eminence derived primary cultured neurospheres	brain
3	chr14:72442000-72442600	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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