Variant report

Variant rs28785552
Chromosome Location chr19:53234161-53234162
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:53210400-53236600 Weak transcription Psoas Muscle Psoas
2 chr19:53210600-53237200 Weak transcription NHDF-Ad bronchial
3 chr19:53214800-53237200 Weak transcription Stomach Mucosa stomach
4 chr19:53215800-53237000 Weak transcription Brain Angular Gyrus brain
5 chr19:53216800-53236600 Weak transcription Brain Cingulate Gyrus brain
6 chr19:53221000-53237400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr19:53225000-53236800 Weak transcription Brain Hippocampus Middle brain
8 chr19:53225200-53236600 Weak transcription Brain Inferior Temporal Lobe brain
9 chr19:53225200-53237000 Weak transcription iPS-18 Cell Line embryonic stem cell
10 chr19:53225200-53237200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr19:53225200-53237200 Weak transcription Pancreatic Islets Pancreatic Islet
12 chr19:53225400-53236600 Weak transcription iPS-20b Cell Line embryonic stem cell
13 chr19:53225400-53237200 Weak transcription H9 Cell Line embryonic stem cell
14 chr19:53226200-53237200 Weak transcription HUVEC blood vessel
15 chr19:53226200-53237200 Weak transcription Osteobl bone
16 chr19:53226400-53237200 Weak transcription HMEC breast
17 chr19:53226800-53235200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr19:53228000-53236400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
19 chr19:53228400-53237400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr19:53228800-53236600 Weak transcription Fetal Heart heart
21 chr19:53229000-53236800 Weak transcription iPS-15b Cell Line embryonic stem cell
22 chr19:53229000-53237000 Weak transcription HUES64 Cell Line embryonic stem cell
23 chr19:53229000-53237200 Weak transcription NH-A brain
24 chr19:53229400-53236600 Weak transcription Stomach Smooth Muscle stomach
25 chr19:53229400-53237200 Weak transcription Aorta Aorta
26 chr19:53229600-53236600 Weak transcription Esophagus oesophagus
27 chr19:53229600-53236600 Weak transcription Placenta Amnion Placenta Amnion
28 chr19:53229600-53236600 Weak transcription K562 blood
29 chr19:53230200-53236200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr19:53231000-53236600 Weak transcription Brain Substantia Nigra brain
31 chr19:53231000-53237000 Weak transcription Muscle Satellite Cultured Cells --
32 chr19:53231000-53237400 Weak transcription Colonic Mucosa Colon
33 chr19:53231200-53236600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr19:53231200-53236600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
35 chr19:53231200-53237200 Weak transcription NHLF lung
36 chr19:53231200-53237400 Weak transcription HUES48 Cell Line embryonic stem cell
37 chr19:53231400-53234600 Strong transcription HUES6 Cell Line embryonic stem cell
38 chr19:53231400-53236400 Weak transcription Primary T killer naive cells fromperipheralblood blood
39 chr19:53231400-53236600 Weak transcription Fetal Thymus thymus
40 chr19:53231400-53237200 Weak transcription HSMMtube muscle
41 chr19:53231600-53236200 Weak transcription Fetal Intestine Large intestine
42 chr19:53231600-53236600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
43 chr19:53231600-53236600 Weak transcription Skeletal Muscle Male skeletal muscle
44 chr19:53231600-53237200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr19:53231800-53234200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr19:53231800-53234800 Weak transcription Thymus Thymus
47 chr19:53231800-53236000 Weak transcription Small Intestine intestine
48 chr19:53231800-53236200 Weak transcription Primary T helper cells PMA-I stimulated --
49 chr19:53231800-53236200 Weak transcription Brain Germinal Matrix brain
50 chr19:53231800-53236400 Weak transcription Primary T cells from cord blood blood

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