The 2.0 version of rSNPBase

Variant report

Variant rs28786712
Chromosome Location chr4:107041195-107041196
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:107031600-107052600 Weak transcription Fetal Thymus thymus
2 chr4:107031800-107053400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr4:107032000-107052200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr4:107032000-107058200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
5 chr4:107033400-107053000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
6 chr4:107033600-107052800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr4:107033600-107053400 Weak transcription Osteobl bone
8 chr4:107033800-107053400 Weak transcription HSMM muscle
9 chr4:107034200-107053400 Weak transcription Right Ventricle heart
10 chr4:107035200-107057200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr4:107035600-107083200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
12 chr4:107035800-107041600 Weak transcription Colonic Mucosa Colon
13 chr4:107035800-107043800 Weak transcription Thymus Thymus
14 chr4:107035800-107052200 Weak transcription Fetal Adrenal Gland Adrenal Gland
15 chr4:107035800-107053000 Weak transcription Primary hematopoietic stem cells short term culture blood
16 chr4:107035800-107053000 Weak transcription Fetal Lung lung
17 chr4:107035800-107053200 Weak transcription Fetal Stomach stomach
18 chr4:107035800-107053200 Weak transcription Sigmoid Colon Sigmoid Colon
19 chr4:107035800-107053400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr4:107035800-107053400 Weak transcription Lung lung
21 chr4:107035800-107053400 Weak transcription Pancreas Pancrea
22 chr4:107035800-107053600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr4:107035800-107053600 Weak transcription Pancreatic Islets Pancreatic Islet
24 chr4:107036000-107053200 Weak transcription Brain Anterior Caudate brain
25 chr4:107036200-107052800 Weak transcription Fetal Muscle Leg muscle
26 chr4:107037200-107053000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr4:107037400-107053400 Weak transcription Brain Cingulate Gyrus brain
28 chr4:107037400-107053400 Weak transcription Brain Inferior Temporal Lobe brain
29 chr4:107037600-107047000 Weak transcription GM12878-XiMat blood
30 chr4:107037600-107053400 Weak transcription Brain Hippocampus Middle brain
31 chr4:107037600-107056200 Weak transcription Monocytes-CD14+_RO01746 blood
32 chr4:107037600-107060600 Weak transcription Skeletal Muscle Female skeletal muscle
33 chr4:107037600-107061600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr4:107037600-107066400 Weak transcription Fetal Kidney kidney
35 chr4:107037800-107041400 Weak transcription Primary T helper naive cells fromperipheralblood blood
36 chr4:107037800-107053000 Weak transcription Primary B cells from peripheral blood blood
37 chr4:107037800-107053000 Weak transcription Liver Liver
38 chr4:107037800-107053400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
39 chr4:107037800-107053400 Weak transcription Adipose Nuclei Adipose
40 chr4:107037800-107053400 Weak transcription HepG2 liver
41 chr4:107037800-107077400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr4:107038000-107047200 Weak transcription Primary T killer naive cells fromperipheralblood blood
43 chr4:107038000-107052400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
44 chr4:107038000-107052800 Weak transcription Brain Substantia Nigra brain
45 chr4:107038000-107053000 Weak transcription Duodenum Smooth Muscle Duodenum
46 chr4:107038000-107053000 Weak transcription Rectal Mucosa Donor 29 rectum
47 chr4:107038000-107053200 Weak transcription Primary B cells from cord blood blood
48 chr4:107038000-107053400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
49 chr4:107038000-107053400 Weak transcription Aorta Aorta
50 chr4:107038000-107053400 Weak transcription Left Ventricle heart

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Last update: Aug 31, 2015