Variant report

Variant rs28820735
Chromosome Location chr12:123878507-123878508
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:123875000-123879000 Weak transcription Ovary ovary
2 chr12:123875000-123879200 Weak transcription Primary T killer naive cells fromperipheralblood blood
3 chr12:123875000-123881000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr12:123875000-123884400 Strong transcription Thymus Thymus
5 chr12:123875000-123886400 Weak transcription ES-WA7 Cell Line embryonic stem cell
6 chr12:123875200-123879000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr12:123875200-123880800 Weak transcription Primary T killer memory cells from peripheral blood blood
8 chr12:123875200-123881000 Strong transcription Fetal Intestine Large intestine
9 chr12:123875200-123884400 Strong transcription HUES6 Cell Line embryonic stem cell
10 chr12:123875200-123884600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr12:123875200-123894400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr12:123875400-123879000 Weak transcription Primary T helper naive cells from peripheral blood blood
13 chr12:123875400-123882200 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
14 chr12:123875400-123882600 Strong transcription Placenta Placenta
15 chr12:123875400-123883600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr12:123875400-123884600 Strong transcription Primary T cells from cord blood blood
17 chr12:123875600-123879600 Strong transcription Fetal Kidney kidney
18 chr12:123875600-123880800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
19 chr12:123875600-123881000 Weak transcription Pancreatic Islets Pancreatic Islet
20 chr12:123875600-123881600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
21 chr12:123875600-123882200 Strong transcription Colon Smooth Muscle Colon
22 chr12:123875600-123882800 Weak transcription Psoas Muscle Psoas
23 chr12:123875600-123884000 Strong transcription HUES48 Cell Line embryonic stem cell
24 chr12:123875600-123884200 Strong transcription Primary T helper naive cells fromperipheralblood blood
25 chr12:123875600-123884200 Strong transcription A549 lung
26 chr12:123875600-123884200 Strong transcription GM12878-XiMat blood
27 chr12:123875600-123884400 Strong transcription HMEC breast
28 chr12:123875600-123884600 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr12:123875600-123885400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
30 chr12:123875600-123894200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr12:123875600-123895600 Strong transcription Fetal Thymus thymus
32 chr12:123875800-123881200 Strong transcription Rectal Mucosa Donor 29 rectum
33 chr12:123875800-123881800 Strong transcription iPS-20b Cell Line embryonic stem cell
34 chr12:123875800-123881800 Strong transcription NH-A brain
35 chr12:123875800-123882000 Strong transcription HUES64 Cell Line embryonic stem cell
36 chr12:123875800-123882200 Strong transcription NHEK skin
37 chr12:123875800-123884200 Strong transcription Primary B cells from peripheral blood blood
38 chr12:123875800-123884600 Strong transcription Placenta Amnion Placenta Amnion
39 chr12:123875800-123894000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr12:123876000-123884400 Strong transcription Primary T regulatory cells fromperipheralblood blood
41 chr12:123876200-123882800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
42 chr12:123876200-123884400 Strong transcription Fetal Lung lung
43 chr12:123876200-123885600 Strong transcription Primary hematopoietic stem cells short term culture blood
44 chr12:123876400-123881400 Strong transcription Fetal Stomach stomach
45 chr12:123876400-123882600 Strong transcription Liver Liver
46 chr12:123876400-123884600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr12:123876400-123894800 Strong transcription Fetal Intestine Small intestine
48 chr12:123876600-123879000 Weak transcription H1 Cell Line embryonic stem cell
49 chr12:123876600-123879400 Weak transcription iPS-15b Cell Line embryonic stem cell
50 chr12:123876600-123881600 Strong transcription HSMM muscle

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