Variant report

Variant rs2885157
Chromosome Location chr9:569038-569039
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:546600-569400 Weak transcription Esophagus oesophagus
2 chr9:547600-571200 Weak transcription Aorta Aorta
3 chr9:549800-593800 Weak transcription Lung lung
4 chr9:552400-574000 Weak transcription Right Ventricle heart
5 chr9:559000-571000 Weak transcription Psoas Muscle Psoas
6 chr9:559000-573600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
7 chr9:561800-570000 Weak transcription Fetal Lung lung
8 chr9:563000-572600 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr9:564000-569400 Weak transcription Brain Substantia Nigra brain
10 chr9:564600-569600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr9:564600-571000 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr9:565800-571000 Weak transcription Breast Myoepithelial Primary Cells Breast
13 chr9:565800-571000 Weak transcription NHEK skin
14 chr9:565800-573800 Weak transcription HMEC breast
15 chr9:565800-574000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr9:566200-569600 Weak transcription A549 lung
17 chr9:566600-571000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr9:566600-573800 Weak transcription ES-I3 Cell Line embryonic stem cell
19 chr9:567000-573000 Enhancers Fetal Intestine Large intestine
20 chr9:567200-569400 Enhancers Duodenum Mucosa Duodenum
21 chr9:567200-571800 Enhancers Liver Liver
22 chr9:567200-572400 Enhancers Fetal Intestine Small intestine
23 chr9:567400-569800 Enhancers Fetal Heart heart
24 chr9:567600-569200 Enhancers Rectal Mucosa Donor 31 rectum
25 chr9:567600-569200 Enhancers Thymus Thymus
26 chr9:567800-569400 Weak transcription Brain Cingulate Gyrus brain
27 chr9:567800-570400 Weak transcription Brain Anterior Caudate brain
28 chr9:567800-570400 Weak transcription Brain Hippocampus Middle brain
29 chr9:567800-573800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr9:568000-571200 Weak transcription Duodenum Smooth Muscle Duodenum
31 chr9:568400-569200 Enhancers Gastric stomach
32 chr9:568400-569400 Enhancers Right Atrium heart
33 chr9:568400-569600 Enhancers Colonic Mucosa Colon
34 chr9:568400-569600 Enhancers Left Ventricle heart
35 chr9:568400-569600 Enhancers Pancreas Pancrea
36 chr9:568600-570400 Weak transcription Stomach Mucosa stomach
37 chr9:568800-569200 Enhancers Fetal Thymus thymus
38 chr9:569000-569200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
39 chr9:569000-569600 Enhancers Ovary ovary

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