The 2.0 version of rSNPBase

Variant report

Variant rs28866344
Chromosome Location chr12:123885484-123885485
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:123875000-123886400 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr12:123875200-123894400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr12:123875600-123894200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr12:123875600-123895600 Strong transcription Fetal Thymus thymus
5 chr12:123875800-123894000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr12:123876200-123885600 Strong transcription Primary hematopoietic stem cells short term culture blood
7 chr12:123876400-123894800 Strong transcription Fetal Intestine Small intestine
8 chr12:123876600-123894800 Strong transcription Fetal Adrenal Gland Adrenal Gland
9 chr12:123876800-123887600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
10 chr12:123877000-123885600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr12:123877400-123889000 Weak transcription Fetal Heart heart
12 chr12:123877400-123895600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
13 chr12:123881400-123886400 Weak transcription ES-I3 Cell Line embryonic stem cell
14 chr12:123881600-123887200 Weak transcription Small Intestine intestine
15 chr12:123881600-123888200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
16 chr12:123881600-123888400 Weak transcription Primary T killer naive cells fromperipheralblood blood
17 chr12:123881600-123888600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr12:123881600-123889000 Weak transcription Fetal Brain Male brain
19 chr12:123881800-123886800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr12:123881800-123887200 Weak transcription Primary B cells from cord blood blood
21 chr12:123881800-123888800 Weak transcription Pancreatic Islets Pancreatic Islet
22 chr12:123881800-123889000 Weak transcription Fetal Kidney kidney
23 chr12:123882000-123886800 Weak transcription HepG2 liver
24 chr12:123882000-123888600 Weak transcription Primary T helper naive cells from peripheral blood blood
25 chr12:123882000-123911600 Weak transcription Primary T killer memory cells from peripheral blood blood
26 chr12:123883200-123895400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
27 chr12:123883400-123885800 Strong transcription Cortex derived primary cultured neurospheres brain
28 chr12:123883400-123886400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
29 chr12:123883400-123886400 Weak transcription Hela-S3 cervix
30 chr12:123883800-123894200 Strong transcription HUVEC blood vessel
31 chr12:123883800-123895200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr12:123884000-123886400 Weak transcription NHLF lung
33 chr12:123884000-123886600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
34 chr12:123884000-123886600 Weak transcription Duodenum Mucosa Duodenum
35 chr12:123884000-123886600 Strong transcription Fetal Stomach stomach
36 chr12:123884000-123887800 Weak transcription Primary hematopoietic stem cells blood
37 chr12:123884000-123888800 Weak transcription Psoas Muscle Psoas
38 chr12:123884200-123886400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr12:123884200-123886400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr12:123884200-123886400 Weak transcription Adipose Nuclei Adipose
41 chr12:123884200-123886400 Weak transcription Brain Inferior Temporal Lobe brain
42 chr12:123884200-123886400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
43 chr12:123884200-123886400 Weak transcription Left Ventricle heart
44 chr12:123884200-123886400 Weak transcription Pancreas Pancrea
45 chr12:123884200-123886400 Weak transcription Rectal Mucosa Donor 31 rectum
46 chr12:123884200-123886400 Weak transcription Skeletal Muscle Female skeletal muscle
47 chr12:123884200-123886400 Weak transcription Stomach Smooth Muscle stomach
48 chr12:123884200-123886400 Weak transcription K562 blood
49 chr12:123884200-123886600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr12:123884200-123886600 Weak transcription Primary B cells from peripheral blood blood

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Last update: Aug 31, 2015