Variant report
Variant | rs28871975 |
---|---|
Chromosome Location | chr14:85836738-85836739 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10134393 | 1.00[EUR][1000 genomes] |
rs10136631 | 1.00[EUR][1000 genomes] |
rs10136758 | 1.00[EUR][1000 genomes] |
rs10138344 | 1.00[EUR][1000 genomes] |
rs10141914 | 1.00[EUR][1000 genomes] |
rs10144184 | 1.00[EUR][1000 genomes] |
rs11846239 | 0.82[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs11848194 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs11850212 | 1.00[EUR][1000 genomes] |
rs11850250 | 0.82[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs12100761 | 1.00[EUR][1000 genomes] |
rs140614 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs17121021 | 1.00[EUR][1000 genomes] |
rs17121060 | 1.00[EUR][1000 genomes] |
rs1951394 | 1.00[EUR][1000 genomes] |
rs2182631 | 1.00[EUR][1000 genomes] |
rs28402332 | 1.00[EUR][1000 genomes] |
rs28680491 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs28706922 | 0.94[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs28729624 | 1.00[EUR][1000 genomes] |
rs28833867 | 1.00[EUR][1000 genomes] |
rs57802016 | 0.91[AMR][1000 genomes] |
rs58358811 | 0.82[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs59459881 | 1.00[EUR][1000 genomes] |
rs60273085 | 0.85[AFR][1000 genomes] |
rs6574815 | 1.00[EUR][1000 genomes] |
rs8022920 | 0.82[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs9323756 | 1.00[EUR][1000 genomes] |
rs9972170 | 0.82[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs9972174 | 0.82[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs9972265 | 0.82[AMR][1000 genomes];1.00[EUR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv1047924 | chr14:85826280-85868228 | Enhancers Weak transcription Active TSS Flanking Active TSS | TF binding regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr14:85832400-85840200 | Weak transcription | Ovary | ovary |