Variant report

Variant rs28914827
Chromosome Location chr17:28549809-28549810
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:21 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:28546200-28552600 Weak transcription Right Atrium heart
2 chr17:28548000-28550600 Weak transcription Placenta Placenta
3 chr17:28548200-28550800 Weak transcription Fetal Adrenal Gland Adrenal Gland
4 chr17:28548600-28550200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr17:28548800-28550400 Flanking Active TSS HepG2 liver
6 chr17:28548800-28550600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr17:28548800-28555400 Weak transcription Lung lung
8 chr17:28549200-28550000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr17:28549400-28550000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr17:28549400-28550000 Flanking Active TSS Fetal Intestine Large intestine
11 chr17:28549400-28550000 Flanking Active TSS Fetal Intestine Small intestine
12 chr17:28549400-28550000 Enhancers Sigmoid Colon Sigmoid Colon
13 chr17:28549400-28550200 Active TSS Duodenum Mucosa Duodenum
14 chr17:28549400-28551800 Enhancers Rectal Mucosa Donor 29 rectum
15 chr17:28549600-28550000 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
16 chr17:28549600-28550000 Enhancers Colonic Mucosa Colon
17 chr17:28549600-28551000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
18 chr17:28549800-28550000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr17:28549800-28550000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
20 chr17:28549800-28550200 Enhancers Fetal Muscle Leg muscle
21 chr17:28549800-28550800 Enhancers Rectal Mucosa Donor 31 rectum

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