Variant report

Variant rs2900127
Chromosome Location chr12:11326071-11326072
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:11322800-11326200 Active TSS HUES6 Cell Line embryonic stem cell
2 chr12:11323600-11326200 Active TSS Ovary ovary
3 chr12:11324200-11326200 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr12:11324800-11326600 Weak transcription Esophagus oesophagus
5 chr12:11325000-11326200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
6 chr12:11325000-11335600 Weak transcription Left Ventricle heart
7 chr12:11325200-11326200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
8 chr12:11325200-11326200 Enhancers Adipose Nuclei Adipose
9 chr12:11325200-11326200 Weak transcription Brain Cingulate Gyrus brain
10 chr12:11325200-11326400 Enhancers Fetal Heart heart
11 chr12:11325200-11327000 Enhancers Brain Substantia Nigra brain
12 chr12:11325200-11327800 Weak transcription Stomach Smooth Muscle stomach
13 chr12:11325200-11328400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
14 chr12:11325200-11328600 Weak transcription Thymus Thymus
15 chr12:11325200-11330000 Weak transcription Primary T cells fromperipheralblood blood
16 chr12:11325200-11330400 Weak transcription Skeletal Muscle Female skeletal muscle
17 chr12:11325200-11332200 Weak transcription Fetal Muscle Leg muscle
18 chr12:11325200-11332200 Weak transcription Sigmoid Colon Sigmoid Colon
19 chr12:11325400-11326200 Enhancers Brain Hippocampus Middle brain
20 chr12:11325400-11326200 Enhancers Fetal Adrenal Gland Adrenal Gland
21 chr12:11325400-11326400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
22 chr12:11325400-11331400 Weak transcription Psoas Muscle Psoas
23 chr12:11325400-11331800 Weak transcription Monocytes-CD14+_RO01746 blood
24 chr12:11325400-11332000 Weak transcription Primary T regulatory cells fromperipheralblood blood
25 chr12:11325600-11326200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
26 chr12:11325600-11326200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr12:11325600-11326200 Enhancers Liver Liver
28 chr12:11325600-11326200 Enhancers Fetal Brain Male brain
29 chr12:11325600-11326200 Enhancers Fetal Brain Female brain
30 chr12:11325600-11326200 Enhancers Placenta Amnion Placenta Amnion
31 chr12:11325600-11326200 Transcr. at gene 5' and 3' Dnd41 blood
32 chr12:11325600-11326200 Enhancers HepG2 liver
33 chr12:11325600-11326200 Enhancers NHDF-Ad bronchial
34 chr12:11325600-11326400 Enhancers iPS-18 Cell Line embryonic stem cell
35 chr12:11325600-11326400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
36 chr12:11325600-11326400 Enhancers Breast Myoepithelial Primary Cells Breast
37 chr12:11325600-11326400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr12:11325600-11326400 Enhancers Fetal Kidney kidney
39 chr12:11325600-11326400 Strong transcription Fetal Thymus thymus
40 chr12:11325600-11326800 Weak transcription Duodenum Mucosa Duodenum
41 chr12:11325600-11327000 Enhancers Brain Angular Gyrus brain
42 chr12:11325600-11327000 Enhancers Rectal Smooth Muscle rectum
43 chr12:11325600-11327600 Enhancers Pancreatic Islets Pancreatic Islet
44 chr12:11325600-11328800 Weak transcription Fetal Intestine Large intestine
45 chr12:11325600-11329000 Weak transcription Primary monocytes fromperipheralblood blood
46 chr12:11325600-11330000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
47 chr12:11325600-11331400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
48 chr12:11325600-11332200 Weak transcription Brain Germinal Matrix brain
49 chr12:11325600-11334400 Weak transcription Primary B cells from cord blood blood
50 chr12:11325600-11338200 Weak transcription Primary B cells from peripheral blood blood

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