Variant report

Variant rs290516
Chromosome Location chr5:60234329-60234330
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:60175800-60239400 Weak transcription NHEK skin
2 chr5:60177200-60239600 Weak transcription HSMMtube muscle
3 chr5:60187600-60239600 Weak transcription Rectal Smooth Muscle rectum
4 chr5:60187800-60239600 Weak transcription Brain Angular Gyrus brain
5 chr5:60189400-60240000 Weak transcription Spleen Spleen
6 chr5:60189600-60239600 Weak transcription Right Ventricle heart
7 chr5:60189600-60240000 Weak transcription Pancreas Pancrea
8 chr5:60193200-60239800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
9 chr5:60213000-60239800 Weak transcription Colonic Mucosa Colon
10 chr5:60213400-60239800 Weak transcription Skeletal Muscle Male skeletal muscle
11 chr5:60213800-60239600 Weak transcription Primary T killer memory cells from peripheral blood blood
12 chr5:60214400-60240000 Weak transcription Brain Substantia Nigra brain
13 chr5:60214800-60240000 Weak transcription Primary T regulatory cells fromperipheralblood blood
14 chr5:60214800-60240200 Weak transcription Aorta Aorta
15 chr5:60218800-60238800 Weak transcription Liver Liver
16 chr5:60221600-60239800 Weak transcription Colon Smooth Muscle Colon
17 chr5:60222000-60239600 Weak transcription NHLF lung
18 chr5:60223400-60239400 Weak transcription NH-A brain
19 chr5:60223600-60239400 Weak transcription Primary T helper naive cells fromperipheralblood blood
20 chr5:60223600-60239800 Weak transcription Brain Anterior Caudate brain
21 chr5:60223600-60240200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
22 chr5:60224000-60239400 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr5:60224000-60239400 Weak transcription K562 blood
24 chr5:60224200-60235800 Weak transcription HSMM muscle
25 chr5:60224200-60239200 Weak transcription HUVEC blood vessel
26 chr5:60224200-60239400 Weak transcription HMEC breast
27 chr5:60224200-60240000 Weak transcription Primary T cells fromperipheralblood blood
28 chr5:60224200-60240000 Weak transcription Rectal Mucosa Donor 29 rectum
29 chr5:60224400-60236200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr5:60224400-60239400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr5:60224400-60239600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr5:60224400-60239800 Weak transcription Rectal Mucosa Donor 31 rectum
33 chr5:60224400-60239800 Weak transcription Stomach Smooth Muscle stomach
34 chr5:60224400-60240000 Weak transcription Fetal Thymus thymus
35 chr5:60224600-60239800 Weak transcription Skeletal Muscle Female skeletal muscle
36 chr5:60225000-60239400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr5:60225200-60239400 Weak transcription Osteobl bone
38 chr5:60225200-60239800 Weak transcription Primary T helper cells fromperipheralblood blood
39 chr5:60225200-60240000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
40 chr5:60225400-60239400 Weak transcription Primary T helper cells PMA-I stimulated --
41 chr5:60225800-60239400 Weak transcription Primary B cells from peripheral blood blood
42 chr5:60228600-60239800 Weak transcription Psoas Muscle Psoas
43 chr5:60232000-60239800 Weak transcription Duodenum Mucosa Duodenum
44 chr5:60232600-60239400 Weak transcription Primary T killer naive cells fromperipheralblood blood
45 chr5:60232800-60235000 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr5:60233000-60235200 Weak transcription Primary hematopoietic stem cells blood
47 chr5:60233200-60234800 ZNF genes & repeats GM12878-XiMat blood
48 chr5:60233400-60236200 Strong transcription HepG2 liver
49 chr5:60233600-60235400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
50 chr5:60233600-60235400 Weak transcription A549 lung

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