Variant report

Variant	rs2908495
Chromosome Location	chr6:139753678-139753679
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs1019237	1.00[CEU][hapmap];0.86[YRI][hapmap];0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1159968	0.80[JPT][hapmap]
rs2005734	0.81[AFR][1000 genomes];0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2908496	0.85[CEU][hapmap];1.00[CHB][hapmap];0.93[JPT][hapmap];0.91[YRI][hapmap];0.90[ASN][1000 genomes]
rs2908499	0.81[ASN][1000 genomes]
rs2908510	0.92[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs3010295	0.80[JPT][hapmap]
rs3010304	0.83[ASN][1000 genomes]
rs3010312	0.89[CEU][hapmap];0.87[YRI][hapmap];0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs3010316	1.00[CEU][hapmap];0.83[YRI][hapmap];0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs3095426	0.83[CEU][hapmap];0.89[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs887780	0.94[EUR][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:139743800-139754600	Weak transcription	Stomach Mucosa	stomach
2	chr6:139746800-139754600	Weak transcription	Colon Smooth Muscle	Colon
3	chr6:139747800-139757400	Weak transcription	Rectal Smooth Muscle	rectum
4	chr6:139751200-139754600	Weak transcription	K562	blood
5	chr6:139751800-139757400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr6:139752800-139754600	Weak transcription	HepG2	liver

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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