Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:139820561..139822171-chr6:139823750..139825747,3	K562	blood:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs1468708	0.83[JPT][hapmap]
rs1468709	0.84[JPT][hapmap]
rs2430189	0.82[ASN][1000 genomes]
rs2908512	0.84[ASN][1000 genomes]
rs2908513	0.82[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs2908517	0.80[ASN][1000 genomes]
rs2908519	0.80[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2908520	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs3010282	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3010284	0.80[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs3010285	0.80[ASN][1000 genomes]
rs3010286	0.83[JPT][hapmap]
rs4896463	0.83[JPT][hapmap]
rs618652	0.90[AFR][1000 genomes];0.93[ASN][1000 genomes]
rs6923416	0.83[JPT][hapmap]
rs9376420	0.84[JPT][hapmap]
rs9399282	0.83[JPT][hapmap]
rs9403080	0.83[JPT][hapmap]
rs9403084	1.00[JPT][hapmap]
rs9495502	1.00[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869066	chr6:139777114-140639695	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	26 gene(s)	inside rSNPs	diseases
2	nsv1026819	chr6:139813809-139834012	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:139822600-139829200	Weak transcription	K562	blood

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