Variant report

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs10218789	0.84[ASN][1000 genomes]
rs10494730	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10754148	0.85[ASN][1000 genomes]
rs10801446	0.85[ASN][1000 genomes]
rs10801447	0.85[ASN][1000 genomes]
rs10921893	0.84[ASN][1000 genomes]
rs10921895	0.84[ASN][1000 genomes]
rs10921896	0.84[ASN][1000 genomes]
rs10921898	0.85[ASN][1000 genomes]
rs10921899	0.85[ASN][1000 genomes]
rs10921904	0.87[ASN][1000 genomes]
rs10921908	0.85[ASN][1000 genomes]
rs10921913	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12029959	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12035482	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12035852	0.84[ASN][1000 genomes]
rs12085765	0.93[ASN][1000 genomes]
rs1576765	0.85[ASN][1000 genomes]
rs2225518	0.81[EUR][1000 genomes]
rs2895786	0.85[ASN][1000 genomes]
rs2989977	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2989978	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2989979	0.83[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2989980	0.85[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs3010166	0.87[EUR][1000 genomes]
rs4010	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs72734161	0.84[ASN][1000 genomes]
rs965614	0.84[ASN][1000 genomes]
rs9970789	0.84[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv872937	chr1:195493538-195849028	Enhancers Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
2	nsv1007203	chr1:195672857-195902360	Enhancers Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
3	nsv947364	chr1:195746611-195752928	Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:195748600-195748800	Enhancers	Spleen	Spleen

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