Variant report

Variant rs295566
Chromosome Location chr5:60397945-60397946
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:60326000-60400800 Weak transcription Left Ventricle heart
2 chr5:60367400-60399400 Weak transcription Primary T helper cells fromperipheralblood blood
3 chr5:60367600-60398400 Weak transcription Skeletal Muscle Female skeletal muscle
4 chr5:60367800-60403800 Weak transcription Primary B cells from cord blood blood
5 chr5:60368200-60402000 Weak transcription Stomach Smooth Muscle stomach
6 chr5:60369000-60400200 Weak transcription Fetal Muscle Trunk muscle
7 chr5:60371600-60398000 Weak transcription HSMM muscle
8 chr5:60378800-60403400 Weak transcription Brain Hippocampus Middle brain
9 chr5:60379400-60403000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
10 chr5:60381000-60419400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
11 chr5:60388200-60399200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr5:60388400-60401400 Weak transcription Fetal Intestine Large intestine
13 chr5:60390800-60398800 Weak transcription Psoas Muscle Psoas
14 chr5:60393000-60404400 Weak transcription Primary T helper naive cells from peripheral blood blood
15 chr5:60394000-60399800 Weak transcription Primary T cells fromperipheralblood blood
16 chr5:60394200-60405000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
17 chr5:60394400-60400400 Weak transcription NHDF-Ad bronchial
18 chr5:60394400-60404400 Weak transcription Primary B cells from peripheral blood blood
19 chr5:60394400-60415400 Weak transcription Sigmoid Colon Sigmoid Colon
20 chr5:60394600-60399200 Weak transcription NHEK skin
21 chr5:60395000-60400000 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr5:60395000-60400600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
23 chr5:60395200-60402000 Weak transcription Small Intestine intestine
24 chr5:60395400-60398600 Weak transcription A549 lung
25 chr5:60395400-60404600 Weak transcription Fetal Brain Male brain
26 chr5:60395400-60428200 Weak transcription HSMMtube muscle
27 chr5:60395600-60398200 Strong transcription Primary T cells from cord blood blood
28 chr5:60395600-60398800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr5:60395800-60399400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
30 chr5:60396200-60398000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr5:60396200-60399000 Weak transcription Primary T helper naive cells fromperipheralblood blood
32 chr5:60396200-60404600 Weak transcription NH-A brain
33 chr5:60396800-60399800 Weak transcription Osteobl bone
34 chr5:60396800-60400600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr5:60396800-60402000 Weak transcription Breast Myoepithelial Primary Cells Breast
36 chr5:60396800-60415400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr5:60396800-60420400 Weak transcription Ovary ovary
38 chr5:60397000-60398200 Strong transcription Primary T helper cells PMA-I stimulated --
39 chr5:60397200-60399000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr5:60397400-60398000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr5:60397400-60398400 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
42 chr5:60397400-60398600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr5:60397400-60399800 Weak transcription Fetal Lung lung
44 chr5:60397600-60398800 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr5:60397800-60398000 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
46 chr5:60397800-60398400 ZNF genes & repeats Primary hematopoietic stem cells blood
47 chr5:60397800-60405000 Weak transcription Primary hematopoietic stem cells short term culture blood

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