Variant report

Variant	rs2960725
Chromosome Location	chr10:117518829-117518830
allele	A/C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs2532699	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2804162	0.87[AFR][1000 genomes]
rs2907516	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2907526	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2907544	0.87[AFR][1000 genomes]
rs2907547	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2907588	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2960645	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2960719	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2960726	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2960732	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs3110771	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:117489400-117520800	Weak transcription	HSMM	muscle
2	chr10:117517800-117519000	Enhancers	ES-I3 Cell Line	embryonic stem cell
3	chr10:117518600-117520200	Weak transcription	HUES64 Cell Line	embryonic stem cell
4	chr10:117518800-117519000	Enhancers	ES-WA7 Cell Line	embryonic stem cell
5	chr10:117518800-117520200	Weak transcription	HUES6 Cell Line	embryonic stem cell
6	chr10:117518800-117520200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
7	chr10:117518800-117520400	Weak transcription	HUES48 Cell Line	embryonic stem cell
8	chr10:117518800-117520400	Weak transcription	iPS-18 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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